Pseudoliparis swirei (Mariana hadal snailfish): 130190468
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Entry
130190468 CDS
T09868
Symbol
npnta
Name
(RefSeq) nephronectin a isoform X1
KO
K06824
nephronectin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04512
ECM-receptor interaction
pswi04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130190468 (npnta)
04518 Integrin signaling
130190468 (npnta)
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Gene cluster
GFIT
Motif
Pfam:
EGF_CA
MAM
cEGF
FXa_inhibition
EGF_3
EGF
EGF_PEAR1L
hEGF
EGF_2
Plasmod_Pvs28
MUCL1
Motif
Other DBs
NCBI-GeneID:
130190468
NCBI-ProteinID:
XP_056265870
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All DBs
Position
24:complement(10286453..10327002)
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AA seq
651 aa
AA seq
DB search
MDLWIKLMLFCSFCFGASADFDGRWPRQMASSNGLCRYGARVDCCWGWTRRSWAHCQPPF
ALTHRVARIRCQPQAVCQPGCKHGDCVGPNKCKCHPGFTGKTCNQEEEPDYLTPPVWASH
LPIFLPVDHQPTRLVMEDLNECGLKPRPCKHRCMNTYGSYKCYCLNGYMLMPDGTCGNAR
TCGMANCQYGCEVMKGEVRCQCPSPGLKLAPDGRTCGDVDECAAGIAVCPRFRKCMNTFG
SYICKCHEGFDLLYVNGKYQCRDVDECSLGQSHCSNFASCYNTPGSYKCKCKDGYRGIGH
DCKRLRLHSLIIPAIPKVVIDPARPGKLPPNHHNHIPDMDQKRTTTTHRPAVTQKIIFTI
IPKSTAATTTTTTAATTTTTTAATTTTTTAAPLPPRRVTPPLRKPAVPTRKPFIPTRKPP
APTRKPYVPPKPVAPTRRPLPPPPPVTPVDNTIQKEVTKQRGDVHIPRNHGHNTVLGVDF
DIELGNTADEAKDDPESGYLSCSFDDGLCGWIRDRDGDLHWETTPDPSGGRYLTIPEVGN
KRTGRGARLVLPLTPPWNDGNLCLSFRHKLAGHHVGMLQVFVKKGKQYSPAVWGRTGGNG
WRHTQITLWGTGLESVILKGERGRGRSGEMAVDDMTLRKGSCTEEHNLRRL
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggatttatggataaagttgatgttgttctgcagcttctgctttggggcaagtgcagac
tttgatggcaggtggccgcggcagatggcctcgtccaacggcctgtgtcgatatggggcc
agggtggactgctgctggggatggacacgccgttcctgggctcactgccagcctcccttc
gccttaactcacagagtagccaggataaggtgccagccccaagctgtgtgccagcctgga
tgtaagcacggagactgcgtgggacccaataagtgcaagtgccaccctggcttcaccggc
aagacctgcaatcaagaagaagagccggactatttaaccccaccagtgtgggccagtcac
cttcctatctttcttcctgtggaccatcagccaacgagattagtaatggaggacctgaat
gagtgcggactgaagccaaggccctgtaaacacaggtgcatgaacacgtatgggagttac
aagtgctactgcctcaacggctacatgctgatgcctgacgggacctgtgggaatgctcgc
acttgtggcatggccaactgccagtacggctgcgaggtgatgaaaggagaggtccgatgt
cagtgtccgtcgccggggttaaagctggctccggatggaagaacctgtggggatgtggat
gagtgtgcagcagggatagccgtgtgtccccggttcaggaaatgcatgaacacctttggt
agctacatctgcaagtgccatgaaggctttgacctgctatacgtcaatgggaaataccag
tgcagagatgtggatgagtgttctttaggtcagagccactgcagcaactttgcctcctgc
tacaacacgccgggctcatacaagtgcaaatgcaaagacggctacagggggattggccac
gattgcaaacgactccgtctgcattctcttatcattccagccattcctaaggtggttatt
gaccctgcgagaccaggcaaactgcctccaaatcatcacaaccacatccccgacatggat
cagaaaagaaccaccactacccaccgcccagcagtgactcaaaagataatcttcaccatt
atccccaaatcaactgctgccacgacgacgaccacgacggcggcaacgacgacgaccacg
acggcggccactacgacgaccacgaccgcagcacctctgcctccaaggagggttaccccg
cctctacgcaagccagcagttcccacccgaaagccctttatcccaacccggaagccgcca
gcaccgacacgcaagccctacgtcccaccaaagccagtggctcccacacgacgcccgctg
ccgccaccgccaccggttacacctgtagacaacactatccagaaggaggtcaccaaacag
agaggagatgtccacatccctcggaaccatggccacaacaccgtcctcggcgtcgacttt
gacattgagctcggcaacacggcagatgaagccaaggacgacccagagtcgggctatctg
agctgctcctttgatgatggtctttgtggttggatcagggacagagatggagacctgcat
tgggagacaacacctgatccatcaggtggaaggtacctcaccattcctgaggtcggcaac
aaaaggaccgggcgaggagcacggctggtcctcccactcacccccccctggaacgatggc
aatctgtgcctgtccttccggcacaagctggcaggccaccacgtgggtatgctgcaggtg
tttgtgaagaaggggaagcagtacagtccagcagtctggggccggacaggaggaaatggc
tggagacacacccaaatcacactatggggcacaggcctggaaagtgtgatcctgaagggg
gagcgtgggcgaggcaggagtggcgagatggccgtggacgacatgaccctgaggaaaggc
tcctgcacagaggagcacaatctgaggagactctga
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