Pseudoliparis swirei (Mariana hadal snailfish): 130190496
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Entry
130190496 CDS
T09868
Symbol
arhgef38
Name
(RefSeq) rho guanine nucleotide exchange factor 38
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130190496 (arhgef38)
Membrane trafficking [BR:
pswi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130190496 (arhgef38)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
BAR
SH3_9
SH3_1
GlcNAc-1_reg
Ovate
Motif
Other DBs
NCBI-GeneID:
130190496
NCBI-ProteinID:
XP_056265908
LinkDB
All DBs
Position
24:complement(10406006..10418791)
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AA seq
816 aa
AA seq
DB search
MDPNEASGAEKEKEKEKDKVIKRRNRPVFLRYLERRKTDTIVAEDSAKGDFNLGTLVRRT
QSDKTEYSAKLKEKMGPHERSTPPSPALDPEEVRSRMMNRRAKVIQELVQTEKDYLTELE
LCIREVVLPLRNLQVVDVDRLFTNTETVCEVSAGLLHRLHKAVAEPDPEAVVIGDIFIQA
KAAIEDVYKIYCYHHDDANISLKSYEKDEEIKQHFTTCVLALKKIYDQEGKPNLLNMGSL
LIKPVQRIMKYPLLLGELWHATPEGHPDYQPLQKAFTAAKIINVNINEFKRRKDIVTKYK
RVVEDEGTLRGKLNKFNIHSIRKKGDRFAGYLKILTGVEPQVRDEIYDREEKLFRSLEKA
VRQLAKNVQCYLQHTQEMVSVAVQNVQDMEDMIKDPIKNLTNGSSENNGNDPYKHFKDSM
ERLVLAPLSSLQGMFTAPQKLIQKRYDKLLDYCSRLERSSSFSSSSTSSTTSSSPSPVLE
DPPGPARRDYEALNALLVEELQRFNKAAYTVLTNCVVYLVALLRGLMDQILLRAPSIQQL
PAPLSNIAEVQNSIMDELNNLTFVKDNAQKLMERKVSFERQRDKKIVMPEVQHQTEEQRA
WLRAEYPPSRLYQLKRKCNGCQEQDLSLLEGELVALLEDTDPSGSSSRWLVLTGGTQGYV
YSTFLKQYNPLRDSQRKGQMAKEQQPQQQPPQQQSPPAMVDEDFDDLSLFVSGSGSSSLR
SFNLNTTDSGSILSGLQGEQESPEDLEETQDAEAQQFYAVHAFQARCDQELTLQEYQHVR
ILQFCDLGGNKDWWLAEANGQKGYVPANYLGRMSYA
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaatgaggcaagcggggctgaaaaggagaaggaaaaagagaaggacaaagtg
ataaagaggagaaaccggcctgtgttcctgcgttacctggagaggagaaagacggacact
atagtggctgaggactcggccaaaggtgacttcaacctggggacgctggtgaggaggaca
cagtctgacaagacggagtacagcgctaaacttaaagagaaaatgggtccacacgaacgg
tccacacccccctctccagcactggacccggaggaggtccgttccaggatgatgaaccgc
agggcaaaggtcatccaggagctggtgcagactgaaaaggactacctcacagagctggag
ctgtgcatcagagaagtggtcctgcctctccggaatctgcaggttgtggatgtagacagg
ttgttcaccaacacagagacagtgtgtgaagtttctgcagggctccttcacagactgcac
aaggccgtcgctgagcctgatccagaggcagttgtcataggagatattttcatccaggcg
aaggcagctatcgaagatgtatataagatttactgttaccatcatgacgatgccaacata
tcactcaaatcctatgagaaagatgaagaaataaagcaacatttcaccacatgtgtatta
gctctgaagaaaatctatgaccaagaagggaaacccaacttactgaacatgggttcactg
ctcatcaaaccggtccagaggatcatgaagtacccgctgctgctcggggagctgtggcat
gcaacacctgaaggtcaccctgactatcagccgctgcagaaggcgttcactgctgccaag
atcatcaatgttaacatcaacgagttcaagagacgcaaagatatagttacgaagtacaag
agggtagtagaggatgaaggcacactgaggggcaaactaaacaagttcaacattcactct
attcgaaagaaaggagacaggtttgctggctatctcaagatccttactggagttgaacca
caggtgagagatgaaatatatgatagagaggagaagctgttcaggagtctggagaaggct
gtgaggcagctggccaagaatgtgcaatgttacctgcagcacactcaggagatggtgtca
gtagctgttcagaatgtccaggacatggaggacatgatcaaggatccaatcaaaaacctc
acaaacggctcttcggaaaataatggaaatgacccatataagcactttaaagacagcatg
gagcgcttggtcctcgctcccctctcctcgctgcaaggcatgttcaccgctccacagaag
ctcatccagaagcgatatgacaagttgctggattactgcagccgcctggagcgctcttct
tctttttcatcctcgtccacgtcatccaccacttcttcctcgccatcaccggtgttagaa
gaccctcccggtcccgccaggagggactatgaagctctcaatgccttgctcgtggaggag
ttgcagaggttcaacaaggccgcttatactgtcctgacaaactgtgtggtgtatctagtg
gccctgctccgagggctaatggatcaaatactactgcgggccccatccatccagcagctg
ccagctccattgtcaaacattgctgaagtgcagaacagcatcatggatgagctgaacaat
ctgaccttcgtcaaggacaacgcccagaagttgatggagcgaaaagtcagctttgagaga
caacgggataagaaaatagtgatgccggaggtgcagcatcaaaccgaggaacagcgagcc
tggctgcgggcagaatatccaccgagccgtctgtaccagctgaagaggaagtgtaacggc
tgccaggagcaggacctcagcctgctggagggagagctggtcgccctgctggaggacaca
gacccatcaggcagcagcagccgctggctcgttctcactggaggcacacagggctatgtc
tactccacattcctgaagcagtacaaccctctgagggactcgcagcggaagggccagatg
gcaaaagagcagcagccgcagcagcagccgccgcagcagcagtcgccgcctgccatggtg
gatgaggacttcgacgaccttagcctgtttgtgtcaggcagtggcagcagcagcctgcga
agcttcaacctcaacaccaccgacagcggctctatcctctctggactgcagggagagcaa
gagagccccgaagatctggaggaaacacaggacgctgaggctcagcagttctacgccgtg
catgcatttcaagcccgctgtgaccaggagctgaccttgcaggagtaccagcatgtccgc
atccttcagttctgtgacctgggaggcaataaggattggtggttagcggaggccaacgga
cagaagggatacgtccctgccaactaccttggcaggatgtcctacgcataa
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