Pseudoliparis swirei (Mariana hadal snailfish): 130190509
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Entry
130190509 CDS
T09868
Name
(RefSeq) ras-related protein Rab-40C-like
KO
K07928
Ras-related protein Rab-40
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130190509
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pswi04031
]
130190509
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
130190509
GTP-binding proteins [BR:
pswi04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
130190509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
GTP_EFTU
Motif
Other DBs
NCBI-GeneID:
130190509
NCBI-ProteinID:
XP_056265933
LinkDB
All DBs
Position
24:complement(21259452..21264876)
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AA seq
297 aa
AA seq
DB search
MRGMTGTQSSPVKSYDYLLKFLLVGDSDVGKREILDSLQDGSVESPYPYSSGIDYKTTTI
LLDGKRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDGIDRWMREIDEHA
PGVPRILVGNRLHLAFKRLVPTEQARAYAEKNRMTFFEVSPLCNFNVIESFTELSRIVLM
RHGMEKFWRPNRVFSLQDLCCRSIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMM
HGRSYSVANSAAAVGGGGGCSGPESKANSLKRSKSFRPPQTPSKNSSSSSKGNCKIS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggatgacgggcacacagagcagtccagtcaagagctacgattatctgctgaaa
tttcttttggtgggagacagcgacgttggaaaacgagaaatcttggacagtttgcaagac
ggatccgtagagtctccctatccctacagcagcgggatcgattacaagaccaccacaatt
ctgctggacgggaaaagagtgaaactggagttatgggacacatcggggcagggcagattc
tgcaccatcttccggtcttactctcgcggagcacagggcatcctgcttgtgtatgacata
actaacggctggtcgtttgatggcatcgaccgctggatgcgggaaattgacgagcacgcc
ccgggcgtacccaggattctggtggggaatcgtcttcacctggctttcaagcggctggtg
ccaacggagcaggcgagggcgtacgccgaaaagaacagaatgactttcttcgaggtcagt
ccgctgtgcaacttcaacgtcatcgagtcgttcacagaactctcccgcatcgtgttgatg
aggcacgggatggagaaattctggaggcccaacagagtcttcagcctccaagatctgtgc
tgccgctccatcgtctcctgcactccagtgcacctcattgacaagttgcccctccccgtg
gccatcaagtcgcacctcaagtccttctccatggccaacggcatgaacgcggtcatgatg
cacggacgctcctactcagtggccaacagcgcggcggcggtgggcggcggcggcggctgc
agcggccccgaaagcaaagccaacagtctgaaacgctccaagtccttcaggcctccgcag
actccttcgaagaactcgtcttcgtcgtccaaggggaactgtaagatctcgtag
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