KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130190542
Entry
130190542         CDS       T09868                                 
Symbol
tlr3
Name
(RefSeq) toll-like receptor 3
  KO
K05401  toll-like receptor 3
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04217  Necroptosis
pswi04620  Toll-like receptor signaling pathway
pswi05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    130190542 (tlr3)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    130190542 (tlr3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    130190542 (tlr3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:pswi04054]
    130190542 (tlr3)
   04090 CD molecules [BR:pswi04090]
    130190542 (tlr3)
Pattern recognition receptors [BR:pswi04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   130190542 (tlr3)
CD molecules [BR:pswi04090]
 Proteins
  130190542 (tlr3)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_5 Tlr3_TMD LRR_9 TIR_2 TIR DUF4969 DHU1_N KH_PARP14_4
Other DBs
NCBI-GeneID: 130190542
NCBI-ProteinID: XP_056265974
LinkDB
Position
24:5647963..5655050
AA seq 910 aa
MHAPRSLLLLPAIIMFHFMTGQHNCAATQKKTSCQVQGGRADCSHLRLKAVPPNLPRNIT
GLDVSHNDLRALPTGSLAPYPLLLHLNVSYNSITKLDQAVCRTLPLLQTLNMEHNVVHVL
SEEDVSHCTNLTRLIMASNKLLLRGEPFSALQSLRVLDVSMNKLESAKLGSRPQLPNLVS
LDLAFNSFTSLKKDDFSFLSHSPFLQVLNMSSVSLKKLEPGCFQPISGLRTLIMDGSNMG
TQVISKLCSELSATAIDSLFLRKTKLITLTNATFKGLKETNLTFLDLSRNDMEKIDGGAF
RWLSRLHTLILTDNNIMLLTEDTFKGLDSLRSLQLTKALVKRHATPVIKDFSFRPLSALE
SLILQRTAVHDITENTFTGLSSLRELDMSWSSCVSLRNINNKTLVSLAGSPLLKLNLTGT
AIAQIHPGSFSFLRNLTTLLLDFNFVKQTLTGEEFEGLNRVEELHMSNNHQTVNLNSRSF
VNVPNLRVLNLGQSLKAEAVNMDPSPFRLLLKLTFLDLSNNNIANFRENMLEGLVNLKVL
RLQHNNLARLWKTGNLGGPVLFLKHAQGLTTLLLDSNGLDEIPAEALRGLSRLREISLGN
NDLDSLKDSIFDDLSSLRVFDMQKNLLTAVRPGVFKAPLRNLSLLLMTKNPFDCTCESML
WFATWLNDTHGTRVPGLRDQYMCNTPLAYSNRSVMDFDGLSCKDKTPFQALYILSSVAVI
VLTATALLVRFHGWRIQFYWNVLINRTLGFSDAKAEEGREFEFDVFVIHAEKDADWVERR
MVPLENDSCRFCLEDRDSIPGVSKVQSFLDNTRKSRKILYVVTEALLRDPWCHRFKAQHV
QHQVIEGRRDSVVLVFLQDVHDYKLSRSLFLRRGMLRSCCVLDWPVHKERVPAFHQKLLI
ALGMTNRLQE
NT seq 2733 nt   +upstreamnt  +downstreamnt
atgcatgccccacgctccctcctcctcctgccggcgatcataatgttccatttcatgacg
ggccaacacaattgcgcggccacccagaagaagacctcctgccaggtgcagggcggcaga
gccgactgcagccacctgcgcctcaaggcggtccctcccaaccttcccaggaacatcacc
ggcctggacgtgtctcacaacgacctgagggcgctgcccaccgggtcgctggccccgtac
ccgctcctcctccacctcaacgtcagctacaacagcatcaccaagctggaccaggctgtg
tgccggacgctgcctctgctgcagacgctgaacatggaacacaacgtagtgcatgtgctg
agtgaggaggacgtgagccactgcaccaatctaacgcggttgattatggcgagtaataag
ctgttgcttcgcggggagcccttctctgcactgcagagcctgagagttctggacgtgtcc
atgaacaaactggagtcggccaagctgggctcccggcctcagctgcccaatctcgtgagc
ctcgatctggcgttcaacagcttcacctctctgaagaaagacgacttctcgttcctcagc
cattcgccgtttctgcaggtcctcaacatgtcatccgtgtcgctgaagaagttggagccc
ggttgctttcagcccatttcaggccttcgtactttgatcatggatggaagcaacatgggc
acgcaggttatttccaaactctgctcggagttgtccgcgacagccatcgacagcttgttt
ctccggaagacgaagctgatcacgctcacaaacgcaacctttaaggggctgaaggaaaca
aatctaacctttctggatctgtcgcgtaacgacatggaaaaaattgatggaggcgcattt
cgttggctgtccagacttcacactctaattttgacagacaacaacatcatgctcctgacc
gaggacacatttaagggactcgacagtttgagaagtctccagttgacgaaagctctcgtg
aaaaggcacgccaccccggtcatcaaggatttctccttccgacccctgagcgccctggag
agtttgatattgcaaagaaccgccgttcatgacatcacagagaacacatttacaggcttg
tcaagtctccgggagctggatatgagctggagtagctgcgtctcgctcagaaacatcaac
aacaagacgttggtctctctcgcgggatcgcctctcttgaagctgaatctaacgggcacg
gcgatagcgcagattcatcccggaagcttctccttcttgagaaacctcaccactctcctc
ctggacttcaacttcgtcaagcagaccctcactggcgaagagtttgaaggcctgaacaga
gtcgaagaattgcacatgtccaataaccaccagacggtcaatctaaactccaggtccttt
gtgaatgttcccaatctgagggtcctgaatctgggacaaagtctcaaagccgaagcggtg
aacatggatccctctccgttcagactcctgctcaaactcaccttcctggatctcagcaac
aacaacattgccaacttccgggagaatatgctggaggggctcgtgaacctgaaagtgctg
aggctccaacacaacaacttagcccgcttgtggaagaccggcaacctcggggggccggtg
ttgttcctcaaacacgcacagggcttgacgaccttactgctggacagcaacgggctggac
gagatcccggcggaggctctgagaggcttgagtcgcctccgtgaaatcagcctgggcaac
aacgacctcgacagtctgaaggattccattttcgatgacctgagctcgctgcgggttttc
gatatgcagaagaatctgctcaccgccgtgaggcccggggtgttcaaagcgccgttgcgc
aacctcagcctgctcctcatgaccaaaaacccattcgactgcacgtgcgagagcatgctg
tggttcgcgacgtggttgaacgacacccacgggacgcgcgtgcccggtctccgggaccag
tatatgtgcaacacgccgctggcgtactccaaccgctccgtcatggatttcgacggcctc
tcctgcaaagacaagaccccgtttcaggctctttacatcctgagcagcgtcgccgtcatc
gtgctgacggcgacggcgctcctggtgcgcttccacggctggaggatccagttctattgg
aacgtattgatcaaccgcacgctcgggttcagcgacgccaaagccgaagagggcagggag
tttgagttcgacgtcttcgtcatccacgccgagaaagacgccgactgggtggagagaagg
atggtgcccttggagaacgactcgtgccggttttgtttggaggatcgggattcgatcccc
ggcgtgtcaaaggttcaatccttcttggataatacgaggaagtccagaaagatcttgtac
gtcgtcactgaagctctcctccgggacccctggtgtcacagatttaaggcccaacatgtc
cagcaccaggtcattgaaggcagacgggactccgtggttctggtcttcctgcaggacgtc
cacgactacaagttgtcccgctcgctcttcctccgtcggggcatgctgcgttcgtgctgc
gtcctggactggcccgtccacaaggagagggtgccggccttccaccagaagctcctcatc
gcactcggcatgacgaatcgattgcaagagtga

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