Pseudoliparis swirei (Mariana hadal snailfish): 130190546
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Entry
130190546 CDS
T09868
Symbol
atg4da
Name
(RefSeq) cysteine protease atg4da
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04136
Autophagy - other
pswi04140
Autophagy - animal
pswi04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
130190546 (atg4da)
04140 Autophagy - animal
130190546 (atg4da)
04136 Autophagy - other
130190546 (atg4da)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130190546 (atg4da)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130190546 (atg4da)
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130190546 (atg4da)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
130190546 (atg4da)
Membrane trafficking [BR:
pswi04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
130190546 (atg4da)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130190546 (atg4da)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
130190546
NCBI-ProteinID:
XP_056265979
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All DBs
Position
24:17845282..17852556
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AA seq
499 aa
AA seq
DB search
MNSVSPSAAQYAGGVMQDELAESRRQQPLERQGSCGLRAEQTPDPGQEVTVEPDEMDKLK
AKLMSAWNNVKYGWTVKSKTSFNKISPVTVLGNSYLLNSEDEVERFRGAFVSRIWLTYRR
EFPQLDGSTWTTDCGWGCMLRSGQMLLAQGLLVHLMPRGWAWPDAQQLTEVDFEVFRPRS
PARAGGVPIPSFGSPRESNTPEKSLTSDQAPKCSQRKRPESKRDRQAEPLHRKLLTWFWD
QPPAPFGLHQLVEISNSSGKKAGDWYGPSIVAHILRKAVDKISVLHNLAVYVAQDCTVYK
EDVMHLCDLSRSHTPPEPSSQAFKSVIILVPVRLGGEALNPAYIDCVKNILKLDCCIGII
GGKPKHSLYFIGFQDEQLLYLDPHYCQTTVDVTQANFSLESFHCSSPKKMPFTRMDPSCT
IGFYAKNKKDFESLCSAVSVALSSSNEKYPIFTFVEGQGQDYGLEGHSSNHSGPAGLILP
PGNLSRSNNRRNSDEFVLL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtttcccccagcgcggcgcagtacgcagggggggtgatgcaggacgagctt
gcggagagccggaggcagcagcctctggagcggcaggggagctgtggtctcagggcagaa
caaactccagaccccggccaggaggtcaccgtagagccggacgagatggacaaactgaaa
gccaaactgatgtctgcatggaacaacgtcaaatacggctggactgtgaagtctaaaacc
tccttcaacaagatatcgccggtcactgtcctgggaaactcctatctgctcaacagtgaa
gacgaggtggagcggtttcgtggggcttttgtgtccaggatctggctgacctacaggagg
gagttccctcagctggacggctccacctggaccacagactgcggctggggctgcatgctg
cgcagtgggcagatgctgctggctcaagggctcctggtccatctgatgcccagaggttgg
gcgtggccagatgctcagcagctaaccgaagtggactttgaggtgttcagaccgcgttcc
ccagcccgggctggaggagttcctatcccatcctttggctctccacgagaatccaacacc
cctgaaaagtccctgacgagtgatcaggcgcccaaatgcagccagaggaagagaccggag
tctaagcgggaccggcaggcggagcccctccaccgcaagctgctcacctggttctgggat
cagcccccggctccttttgggctccatcagctggtggaaattagcaacagttcagggaag
aaagctggtgactggtacggcccctctatagtggcacacattctaaggaaagctgtagac
aaaatctctgtgcttcacaacctggctgtatacgtggctcaggattgtaccgtgtacaag
gaggacgtgatgcatctgtgtgacctgtcgcggagccacactccccccgagccatccagc
caggcttttaagtccgtcatcatcctggtgccggttcggctgggaggggaggccctcaac
ccggcctacatcgactgtgtcaagaacatcctaaagctggattgttgtattggaatcatc
gggggcaaaccgaagcactcactttacttcattggcttccaagatgagcagctgctgtat
ctggaccctcactactgccagaccacggtggatgtcactcaggccaacttctcactagag
tcattccactgtagctcgcccaagaagatgcccttcacccggatggatcccagctgcacc
atcggcttttacgccaagaacaagaaggactttgagtctctgtgttctgctgtcagtgtg
gccctgtcgtcatcgaacgagaagtaccccatctttaccttcgtagagggccagggtcag
gattacggtctagagggccacagcagcaaccacagtggacctgcgggcctcattctgccc
ccaggcaacctgagcaggagcaacaacagacgaaacagcgacgagtttgtcttgctgtga
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