Pseudoliparis swirei (Mariana hadal snailfish): 130190571
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Entry
130190571 CDS
T09868
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
pswi04517
IgSF CAM signaling
pswi04530
Tight junction
pswi04810
Regulation of actin cytoskeleton
pswi05100
Bacterial invasion of epithelial cells
pswi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130190571 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130190571 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
130190571 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130190571 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130190571 (arpc1a)
05100 Bacterial invasion of epithelial cells
130190571 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130190571 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130190571 (arpc1a)
Membrane trafficking [BR:
pswi04131
]
Others
Actin-binding proteins
Arp2/3 complex
130190571 (arpc1a)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
130190571 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
RMC1_N
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_IFT122_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
130190571
NCBI-ProteinID:
XP_056266028
LinkDB
All DBs
Position
24:complement(4150300..4157288)
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNCDRTQIAISPNNHEVHIYKKSGSQWVKTHELKEHNGHVTGIDW
APKSDRIVTCGADRNAYVWSQKEGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPVRSTVLGLDWHPNNILLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSASGNRLAWVSHDSTVTVVDSSKTASPS
QLKTDFLPLLSVIFVSENSLVAAGHDCCPMLFRCEDGEALTFASKLDIPKQSIQRNISAM
ERFRNMDKRATTEDRNTALDTLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKSL
EASIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcatcagttcctgttggaacccatcacctgccacgcgtggaactgcgatagg
acacaaattgccatcagcccaaataaccatgaagtccacatctacaaaaagagtggcagc
cagtgggttaagactcacgaattgaaggagcacaatggacacgtcacaggcattgactgg
gctcccaaaagtgaccgtatagtgacatgtggagcagaccgtaacgcctatgtgtggtcc
cagaaggaaggggtatggaagcccacactggtcatcctcaggatcaaccgagccgccacc
tttgtcaagtggtccccgctggagaacaagtttgcagtcggaagtggcgctcgactcatc
tccgtctgctactttgagtctgagaacgactggtgggtgagcaagcacatcaagaagcca
gtccgctccaccgtcctcggcctggactggcatcccaacaacatcctgctggctgccggc
tcctgtgacttcaaatgcagggtgttctcagcctacattaaggaggtggaagagaaacca
ggccccaccccctggggcagcaagatgccatttggggctgtgctagcagaatttggagga
gcgggaggagggggttgggtccactctgtctctttctctgcatctggtaaccgcctggcc
tgggtcagccatgacagcactgtcactgtggtggacagctctaagacggccagtccttca
cagctgaagacggacttccttcctctcctcagcgtcatttttgtttcggagaacagtcta
gtcgctgcgggccacgactgttgccccatgctgttccgttgcgaagatggcgaggcgctg
acctttgcgtcgaagctggacatccccaagcagagtatccagaggaacatctccgccatg
gagcgcttcaggaacatggacaagagagccaccaccgaggaccgcaacaccgccctggac
acgctgcaccagaacagcatcacccaagtgtccatctatgaaggagacaaaagggattgt
cgcaagttctgcaccaccggcatcgacggagcgatgaccatctgggacttcaagagtcta
gaagcttctatccagggtctccgcatcatgtga
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integrated database retrieval system
