Pseudoliparis swirei (Mariana hadal snailfish): 130190579
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Entry
130190579 CDS
T09868
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
pswi04517
IgSF CAM signaling
pswi04530
Tight junction
pswi04810
Regulation of actin cytoskeleton
pswi05100
Bacterial invasion of epithelial cells
pswi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130190579 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130190579 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
130190579 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130190579 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130190579 (arpc1b)
05100 Bacterial invasion of epithelial cells
130190579 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130190579 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130190579 (arpc1b)
Membrane trafficking [BR:
pswi04131
]
Others
Actin-binding proteins
Arp2/3 complex
130190579 (arpc1b)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
130190579 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_EML
RMC1_N
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_TEP1_2nd
PEP5_VPS11_N
WD40_MABP1-WDR62_2nd
Tricorn_2nd
WDR90_beta-prop_4th
SH3_3
Phage_T7_55
Motif
Other DBs
NCBI-GeneID:
130190579
NCBI-ProteinID:
XP_056266042
LinkDB
All DBs
Position
24:complement(4142141..4149107)
Genome browser
AA seq
378 aa
AA seq
DB search
MTYHSFLLEPIICHAWNKDGTQIALCPNNHEVHIYKKDGTKWTRIHELKEHNGQVTGIDW
ATDSNRIVTCGADRNAYVWTLKEGAWKPTLVILRINRAARCVKWSPQENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGCCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGEMLFESGGSVAAGQTGGGGWVHSVCFSHSGNRLAWTSHDSTVSVAEGG
KAGTVNSLSSQSLPLLCVTFITESSLVAAGHDCYPVLFVYDGAKTSLTFGGKLDVPKQVA
QKGISARERFQNLDRRASESQSTEKDLNSLHKNSISQISVLEGGRNHCIKFCTTGMDGGM
CIWDVKSLESAMKDLKIV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacttaccatagtttcctgctggaaccaattatctgtcatgcctggaacaaagatggt
acccagatcgccctgtgccccaacaaccacgaggtccacatctacaagaaggatggcacc
aagtggaccaggatccatgagctgaaggagcacaacggtcaggtgacaggtatcgactgg
gccacggacagcaaccgcatcgtgacctgcggagcggaccgcaacgcctacgtgtggacc
ctgaaggagggcgcctggaagcccacgctggtcatcctcaggatcaaccgcgcggcccgc
tgcgtcaagtggtcgccacaggagaacaagttcgccgtgggcagcggctcgcgcctcatc
tccatctgctactttgagcaggaaaacgactggtgggtgtgtaagcacatcaagaagccg
atccgctccaccatcctcagtctggactggcatcccaacaacgtcctgctggctgccggc
tgctgcgacttcaaatgcagggtgttctccgcctacattaaggaggtggaggagaagccc
ggccccaccccctggggcagcaagatgccgttcggggagatgttgtttgaatctggcggc
tctgtggcggcggggcagacgggaggcggcggctgggtgcacagcgtctgcttctcgcac
tccggcaaccgcctggcctggacctcccacgactccacggtgtccgtcgccgagggaggc
aaggccggcacggtgaacagtctgagctctcagtctcttcctctgctgtgtgtcaccttc
atcacggagagcagcttagtcgcagctggccacgactgctacccggtgctgttcgtgtac
gacggggccaaaaccagcctgacatttggtggcaagctggacgttcctaagcaggtggcg
cagaagggcatcagtgccagggaacggttccagaacctggaccgccgggcctcggagagc
cagagcaccgagaaggacctgaactccctgcacaagaacagcatcagccaaatctcggtg
ctggaaggaggacgaaaccactgcattaagttctgcaccaccggcatggatggaggaatg
tgcatctgggacgtgaagtctctggagtctgcaatgaaggatttgaagatagtctga
DBGET
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