Pseudoliparis swirei (Mariana hadal snailfish): 130190585
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Entry
130190585 CDS
T09868
Name
(RefSeq) syntaxin-3-like isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130190585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130190585
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130190585
Membrane trafficking [BR:
pswi04131
]
SNARE
Syntaxin (Qa)
Stx-PM
130190585
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
130190585
Exosomal proteins of other body fluids (saliva and urine)
130190585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
DUF8045
COG6_N
FlaC_arch
T4SS
YtxH
STX6_10_61_N
Baculo_F
Hydro_N_hd
Syntaxin-18_N
FUSC
ArAE_1_C
WXG100
DUF6591
Motif
Other DBs
NCBI-GeneID:
130190585
NCBI-ProteinID:
XP_056266054
LinkDB
All DBs
Position
24:complement(11883180..11893552)
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AA seq
285 aa
AA seq
DB search
MKDRLAQLKEKSDAGVDDIEIPVENEAFMDDFFNQSEDIRSSIDKIDESVVEIKKLYSTI
LSAPTSEQKTHDDVEALTNEIKKSANNARNKLKSIERQLESNTDERASADFRIRKSQHAI
LAKKFVEVMTKYNEAQVDFRDKSKGRIARQLEITGKATTDEELEEMLEGGNSAVFTAGIM
DSKINQQALNEIEARHKDIMRLESSIKELHDMFVDIAMLVENQGGMMDRIEGNMDQSVGF
VERAVADTKKGAKFQQEARRKQMMIFCCCVILALILGSFIFSFFK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgattggcgcagctgaaagagaagagtgatgctggagtcgatgacattgag
attcctgtggagaacgaggctttcatggatgatttctttaatcagtcggaagatatccgc
agcagcattgacaagattgacgagagtgtcgtagaaataaaaaaactctactccaccatc
ttgtctgcccccacatctgaacagaaaacacatgatgacgttgaagccctcaccaatgag
atcaagaagtcagccaacaatgcaagaaacaaacttaagagtattgagcgacagcttgag
tcaaacacagacgagagggcctcagccgacttcaggatacgcaaatcacagcatgctatc
ctggccaagaagtttgtagaggtgatgacaaaatacaacgaggctcaggttgacttcaga
gataagagcaaaggacgaatcgcccgacagctggagatcacgggtaaagcaacgactgac
gaggaactggaagagatgcttgagggaggcaactcagctgttttcactgcagggattatg
gactctaaaatcaaccagcaggccttgaatgagattgaggctcgtcacaaagacatcatg
aggctggaaagcagcatcaaagagctccatgacatgtttgttgatatcgccatgctggtt
gagaatcagggtggcatgatggacagaattgagggcaacatggaccagtcagtgggcttt
gtagagagagcagtggccgacaccaaaaagggagccaaattccaacaagaggcgcgtagg
aaacaaatgatgatcttctgctgctgtgtgatcttggccttgatactgggttcatttatc
ttcagcttcttcaaatag
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