Pseudoliparis swirei (Mariana hadal snailfish): 130190627
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Entry
130190627 CDS
T09868
Symbol
lyl1
Name
(RefSeq) uncharacterized protein lyl1 isoform X1
KO
K15604
protein lyl-1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130190627 (lyl1)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Tal/Twist/Atonal/Hen, Lymphoid factors
130190627 (lyl1)
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Gene cluster
GFIT
Motif
Pfam:
HLH
COE1_HLH
PMBR
Motif
Other DBs
NCBI-GeneID:
130190627
NCBI-ProteinID:
XP_056266109
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Position
24:18003868..18015019
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AA seq
499 aa
AA seq
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MVHRARCSHTEDTRLTRWAAGTHGGLATMMEKLNLTGPPASPPDLPRPFSSSSSSVASSP
SCVSVEHGGLLHSQTAASSDAIRSPCPANETGHGGRTDIPSAGSIPSPIATAMALTGHHA
DSVAAPEPIVMETGKEEEEKRGGPKSTTAPTASTNGSPTLSSPPPLLPAPAKNSTFPVPP
LTSKVSFSLFSSSSPLPPHIPVISLGHSKPPLPLHNTPLTALHPIPNLLHGPHGDLRRGQ
RSCLPTVGLAASGGPSAPSLGPLLPQQYLSAHPFFTSSYLSPSGGNYGVISSSRIKRRPS
SHFEMEINDCPAHSDSDYVCLTGPPQKIARRVFTNSRERWRQQNVNGAFSELRKLIPTHP
PDKKLSKNEILRLAVKYINFLVTLLNDQAQDKGRDSAEDEDERAAAGLDSNKLNRLFHCD
APPPSAAAPPPSARPASVHRDRHSTDSVIALASSPATSSCYGDTDSEESFGAKTSLVTNG
ILGTVKAQIRMVAATNDER
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggtccacagagcgcgctgctcacacactgaagacacacggctcacacgctgggcagcc
gggactcacgggggattggccaccatgatggagaagctgaacctcaccggcccacctgcc
tcaccccccgacctacctcgacccttctcctcctcgtcctcctccgtcgcctcctctcca
tcctgtgtctccgtggagcatggcggtctcctccacagccagaccgcggcatcctcagac
gccatcagaagcccgtgtcccgcgaacgagacggggcacgggggacgcacggatatcccc
tctgctggctcgattccgtcccccattgccacggcgatggcgttaaccggtcaccacgca
gactcagttgccgcacctgagcccatcgtcatggagaccgggaaggaggaggaggagaag
cggggaggaccaaagagcaccacggccccgactgcctccaccaacgggtccccgactctt
tcctctccacctccgctcctcccggcgccagccaaaaactcaacgttccccgtaccgcct
ctgacctccaaagtgtccttttctttgttttcatcatcctctcctcttcctccacacatt
ccagtcatcagcctcggtcacagcaaaccccccctcccactccacaatacccctttgact
gccctccacccgatacccaacctccttcatgggccccacggggaccttcgccgtggtcag
cggtcctgtctgcccacggttggcctcgcagcttctggggggccctcagctccctccctg
ggacccctgttgcctcagcagtacctgtctgcacaccccttcttcaccagttcttacctg
agtccctcgggaggaaactatggcgtcatcagcagcagccgcatcaaaagaagaccctcg
tcacactttgagatggagatcaatgactgccctgcgcactcagacagtgattatgtgtgt
ctaacaggccctcctcagaaaatcgctcgccgtgtcttcaccaacagccgtgagcgctgg
cgacagcaaaacgtgaacggggctttctccgagctgaggaagctcattcccacacacccg
cccgacaagaagctcagcaagaacgagatcctccgtctggctgtcaaatacatcaacttc
ttggtcacgctgctcaacgaccaggcccaggacaagggcagggactcggctgaggacgag
gacgagagagccgcggccgggttggacagtaataaactgaatcgtctttttcattgcgac
gctcctcctccgtcggccgccgccccgccaccctcagcccgccctgcgtcagtccacaga
gacagacactcaactgactcagtgattgctctggctagctccccggccacatccagttgc
tatggcgacacagacagtgaggagagcttcggggctaagacctctttggtgaccaacggc
atcctgggaacggtcaaggctcagataaggatggtggcagccacaaatgatgagcggtga
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