Pseudoliparis swirei (Mariana hadal snailfish): 130190638
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Entry
130190638 CDS
T09868
Symbol
chrnb5a
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130190638 (chrnb5a)
04082 Neuroactive ligand signaling
130190638 (chrnb5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130190638 (chrnb5a)
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
130190638 (chrnb5a)
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
DUF2754
Motif
Other DBs
NCBI-GeneID:
130190638
NCBI-ProteinID:
XP_056266124
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Position
24:26213414..26230865
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AA seq
513 aa
AA seq
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MSANTVLLLFILSHTGSRAENAEERLVNFLLGPERYNKLIRPAVNKSQQVTISIQVSLAQ
LISVNEREQIMTTNLWLFQEWNDYRLRWDPEKYEGIKKLRIPSKHIWLPDIVLYNNADGV
YEVSFYCNAVVSNTGDIFWLPPAIYKSACAIEVQNFPFDQQNCTLKFRSWTYDHTELDLM
LTSDFASLDDFTPSGEWDIVSLPARKNEDPDDATYLDITYDFVIKRKPLFYTINLIIPCV
LISSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSHAVPLIGKYLMFTMV
LVTFCIVTSVCVLNVHHRSPSTHHMPDWVKRFFLVRLPNLLFMRRPGASNVRDQLRNRKY
ANRSAVGKNNSQSGTDKRQYSNVRLGGIRTDANSFYVNEDSANKFCWKGDDVPERGGGGG
GVFSDFRRPSAVQWDADMEEAVDGVRYIAEHMKTENGDEGIIEDWKYVAMVIDRLFLWIF
ILVSLVGTLGLFMQPLFQSYNTPTADGPEYGDF
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaacaccgtcctcctgctcttcatcctctctcacacaggcagcagggccgag
aatgccgaggagcgtctggtgaacttcctgttgggtcccgagcgctacaacaagctgatc
cgaccggccgtcaacaagagccaacaggtcaccatctccatccaggtgtctctggcgcag
ctcatcagtgtaaatgagagggaacagataatgacgaccaacttgtggctgtttcaggag
tggaacgactacaggctcagatgggacccggagaagtacgaaggcatcaagaaactacga
ataccatccaaacacatctggcttcctgacatagttctatacaacaacgccgacggcgtg
tacgaggtctccttctactgcaacgccgtggtctccaacacgggcgacatcttctggctc
ccgccggccatctacaagtcggcctgcgccatcgaggtgcagaacttccccttcgaccag
cagaactgcacgctcaagttccgctcgtggacctacgaccacacggagctggacctgatg
ctcaccagcgacttcgccagcctcgacgacttcacgccgagcggcgagtgggacatcgtg
tcgctgccggcgcgcaaaaacgaggaccccgacgacgccacctacctggacatcacctac
gactttgtgatcaagaggaagccgctgttctacaccatcaacctgatcatcccctgcgtg
ctcatctcgtcgctcgccatcctggtgttctacctgccgtcggactgcggcgagaagatg
acgctgtgcatctccgtgctgctcgcgctcaccgtgttcctgctgctcatatccaagatc
gtgccgccgacctctcacgccgtgccgctcataggtaaatacttgatgttcaccatggtg
ctggtcactttttgcatcgtgaccagcgtctgcgtcctcaacgtgcaccaccgctccccg
tccacccaccacatgcccgactgggtcaagcgcttcttcctggtccgcctgcccaacctc
ctcttcatgaggcgtccgggagcctccaacgtccgcgatcaactccgaaacaggaagtac
gccaaccggagcgccgtcgggaaaaacaattcccagagcggcacggacaagaggcagtac
tccaacgtcagactcggcgggatccgaacggacgccaactccttctacgtgaacgaggac
tcggccaacaagttttgctggaagggcgacgacgtcccggagaggggcggcggcggcggc
ggcgtgttttcagacttccggaggccgtcggcggtccagtgggacgcagacatggaggag
gccgtggacggcgtgagatacatcgccgagcacatgaagacggaaaacggcgacgaaggg
atcatagaggactggaagtatgtcgccatggtgatcgaccgtctcttcctgtggatcttc
atcctggtgtctctggtgggaactctggggctcttcatgcagccgctgttccagagctat
aacacacccacagccgacggcccggagtatggagatttctaa
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