Pseudoliparis swirei (Mariana hadal snailfish): 130190649
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Entry
130190649 CDS
T09868
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04120
Ubiquitin mediated proteolysis
pswi04137
Mitophagy - animal
pswi04144
Endocytosis
pswi04340
Hedgehog signaling pathway
pswi04350
TGF-beta signaling pathway
pswi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130190649
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130190649
04350 TGF-beta signaling pathway
130190649
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130190649
04137 Mitophagy - animal
130190649
09144 Cellular community - eukaryotes
04520 Adherens junction
130190649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130190649
04121 Ubiquitin system [BR:
pswi04121
]
130190649
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130190649
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130190649
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
130190649
Autophagy
Mitophagy
Other mitophagy associated proteins
130190649
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
HECT type E3
130190649
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130190649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
130190649
NCBI-ProteinID:
XP_056266146
LinkDB
All DBs
Position
24:complement(20351860..20408458)
Genome browser
AA seq
775 aa
AA seq
DB search
MSSQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKADSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
GPNDNDTVKGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAEASCPPGEPRIQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHRVLNPSPNGSRVAMDSQNTNLS
HPPPLKDQGGPGVPQQALSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHC
RIEVCREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPY
YGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYRQLL
GKPITLDDMESVDPDLHNSLVWILDNDITCVLDHTFCVEHNAYGEIIQHELKPNGQSLPV
TEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKSFDEKELELIVCGLGKID
VADWKSNTRLKHCTLDSNIVKWFWKAVETFDEERRARLLQFVTGSSRVPLQGFKALQGAA
GPRLFTIHQIDANANNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccaaggagtgaggagaaacggcccagtgaagctgcggttgaccgtcctgtgt
gcaaagaacctggcaaaaaaagacttcttccggttgccagatccttttgccaaagtggtg
gtggacggctcaggacaatgccactctacagatactgtgagaaatacgctggacccaaag
tggaatcaacattatgatctatacattggaaaggcagactcgatcaccatcagtgtatgg
aaccacaagaagatccacaaaaagcagggcgcaggtttcctcggctgtgtccgcctcctg
tccaacgccatcaacagactcaaagacactggctatcagagactggacctgaataagttg
ggccccaatgacaacgatactgtgaaaggacaaatagtcgtaagtcttcagtccagagat
cgcattgggacaggagggccggtggtggactgcagtcgtttgttcgacaatgacttaccc
gatggctgggaagagaggaggaccgcctctggaaggatacagtacctgaaccacatcaca
cgaaccacccagtgggagagacctacgaggccggcgtcggagtactccagcccatccggg
cggccgctgagctgcgtggtggacgagaacacgccagtgatgacgccggttaatggggcc
gaggccagctgcccgccgggcgaaccgcggatccaggagagacgggttcgatcgcagcgg
catcgcaactacatgagtcgaacacacctgcacacaccgcctgacctgcccgagggttat
gagcaaagaacaactcagcagggtcaagtctacttcctccacacacagactggagtcagc
acctggcatgaccctcgggtgcccagggacctaagcaacgtgaactgtgaggagctgggt
ccactgccaccaggctgggagatcagaaacacagccacaggtcgcgtctactttgtcgac
cacaacaatcgaaccacacagttcacggacccgcggctatccgctaacctgcatcgtgtg
ctcaacccaagtccaaatggatcccgtgtggccatggacagccaaaacactaacctcagt
catccgccgccgctgaaggaccagggtggtcccggcgtcccccagcaggcgctgtccccc
gcccagctgcccgaggaggccgagtgcctgacggtgcccaagtacaagagggacctggtg
cagaagctgaagatcctgcggcaggagctgtcccagcagcaaccccaggccggccactgt
cgcatcgaggtctgccgtgaagagatatttgaggagtcgtaccggcaggtgatgaagatg
cgtccaaaggacctctggaaaagactgatgatcaaattcagaggcgaagagggtctggac
tatggtggggtggcaagggaatggttatacctgctgtcccacgagatgctgaacccctac
tacggcctgttccagtactccagagacgacatctacactctacagattaatccggactct
gccgtcaacccggagcacctgtcgtacttccacttcgtgggtcgcatcatgggcatggcg
gtgttccacggccactacatcgacggaggcttcacgctgcccttctacagacagctgttg
gggaaacccatcacgctggacgacatggagtccgtcgacccggacctccacaacagcctc
gtctggatcctggacaatgacatcacctgcgtcctggaccacactttctgtgtcgagcac
aatgcctacggagaaatcatccaacacgagctcaagcccaacggccagagtctcccggtc
acagaggacactaagaaggagtatgtcaggttgtatgtgaactggcgtttcctgcacggc
atcgaggctcagtttctggctctgcagaaaggcttcaatgaggtcatccctcaacacctg
ctcaaatcctttgatgaaaaagagctggagctcatcgtgtgcggcctgggaaagatcgac
gtcgctgactggaagtccaacacccgcctgaagcactgcaccctggacagcaacatcgtc
aagtggttctggaaagccgtggagacgtttgacgaggagaggagggcccggctgctgcag
tttgtcaccggctcctcccgagtcccactgcaaggcttcaaggctctccagggcgctgcc
gggcccagactcttcaccattcatcagatcgacgcaaacgccaacaacctgcccaaagcc
cacacctgcttcaaccggattgacatcccgccctacgagagctacgacaagctgtacgac
aagctgctgactgccatcgaggagacctgtggcttcgccgtggagtga
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