Pseudoliparis swirei (Mariana hadal snailfish): 130190682
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Entry
130190682 CDS
T09868
Symbol
lrrtm1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
130190682 (lrrtm1)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_9
LRR_1
LRR_5
LRR_14
LRR_NXF1-5
LRR_LRWD1
LRRNT
DUF4750
HemY_N
EphA2_TM
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
130190682
NCBI-ProteinID:
XP_056266203
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Position
24:complement(30189495..30191992)
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AA seq
517 aa
AA seq
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MLMDFLLIGLYLKWPLKRPPGAALCLLGVALRALPPVGAACPRLCRCDSKLLYCEGLNLT
DIPRNLSSALGLSLRDNSLTELREGQLPGPSQLTWLYLDHNSIGAVEEGAFERLRRLKEL
DLSSNRIPALPNGTFRPLPNLRILDLSSNRLQALEPDLFLGLRKLTNLHLRYNLLKLVPV
RIFQDCRSMQFLDLGYNRLQSLARNSFAGLSQLTELHLEHNELVKVNLAHFPRLVSLRTL
YMHHNRAAVVVNTLDWTWPFLEKIDLSANEIEFMEPHVFESAPNLKVLMLGSNRLRSVDR
RTLASWASLGSISLAANEWECSRNVCSLASWLGAFAGRRDGALRCSSPDAAQGEDVLDAV
SAFQLCEDPPAKATAAGPYASTRDPVRGGSAFLGPYGGEAVTGSLAVTAGLDDLESAMQI
HKVVTGTMALIFSFLIVVLVLYVAWKCFPAGLRQLRRCFGSQRRKQKQKQSMQQMAAIST
PEYYVDYKPDHIEGALVIINEYGSCTCQQQPSRECEV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggatttccttctcattggactgtacttgaagtggcccctgaagaggcccccc
ggggcggcgctgtgtctcctgggggtggccctgagggcgctgcccccggtgggggcggcg
tgtccccggctgtgccgctgcgacagcaagctgctgtactgcgaggggctgaaccttacg
gacatcccccgcaacctgagcagcgccctgggcctgtccctgagggacaacagcctgacg
gagctgcgtgagggccagctgccgggcccctcgcagctcacctggctctacctggaccac
aacagcatcggcgcggtggaggagggggccttcgagcggctgaggcggctcaaggagttg
gacctgagcagcaaccggatccccgcgctgcccaacggcaccttcaggcccctccccaac
ctgcgcatcctggacctctcgtccaaccggctgcaggcgctggagccggacctgttcctc
ggcctgaggaagctcaccaacctgcacctgcgctacaaccttttgaagttggtgccggtg
cgtatttttcaagactgccggagcatgcagttcctggacttgggatacaaccgactgcag
agcctggcgaggaactccttcgccggcctctcgcagctgacggagctgcacctggagcac
aacgagctggtgaaggtcaacctggcccacttcccgcgcctcgtctccttgcgcacgctc
tacatgcaccacaaccgcgccgccgtcgtggtcaacacgctggactggacctggcctttc
ttggagaagatcgacctctcggccaatgagatcgagttcatggagccgcacgtctttgag
agcgcgcccaacctcaaggtgctgatgctgggctccaaccggctgcgctccgtggaccgg
cgcacgctggcctcctgggcgtctctgggcagcatctcgctggcggccaacgagtgggag
tgcagccgcaacgtgtgctcgctggcctcctggctgggcgccttcgccggccggcgggac
ggcgccctgcgctgctccagccccgacgcggcgcagggcgaggacgtgctggatgccgtg
tctgcgttccagctctgcgaggaccccccggcgaaggcgaccgcggcgggcccgtacgcc
tcgacaagggacccggtccggggggggtcggcgttcctcggcccgtacggaggcgaggcg
gtcaccggctctctcgcggtcacggcgggcctcgacgacctggagagcgccatgcagatc
cacaaggtggtgaccggcaccatggcgctcatcttctccttcctcatcgtggtgctcgtg
ctctacgtggcgtggaagtgcttcccggcgggactccggcagctgaggcgctgcttcggc
agccagcgccggaagcagaagcagaagcagagcatgcagcagatggcggccatctccacc
ccggagtactacgtggactacaagcccgaccacatcgagggggcgctggtcatcatcaac
gagtacggctcctgcacctgccaacaacaaccttctcgggaatgcgaagtgtga
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