Pseudoliparis swirei (Mariana hadal snailfish): 130190715
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Entry
130190715 CDS
T09868
Symbol
samd1b
Name
(RefSeq) sterile alpha motif domain-containing protein 1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130190715 (samd1b)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
130190715 (samd1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
130190715
NCBI-ProteinID:
XP_056266242
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All DBs
Position
24:22686889..22695248
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AA seq
657 aa
AA seq
DB search
MSEPNKYREWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKKSEFTAAGGGGAEAAARERTKRDHPNNNGDSAHSFTDQE
EDSEPSPEPRTPTPASTGDTKPEQPAACGASSGNGRLMCGATTGCAVGSGCEEEKASAPR
DYKGSGPRGVGDCPSPGLGHTTNARGRGGDASGITPSVADAVPEEREPRVSRDDTPNKTS
SGSVSRLPPEQQRQQQAVPLKPQLGVGGGGTGTAGRHANSDLGDRLVASVRSLSEKSIRG
GSAAAAATRGHIKPLELKEILGYMSSHDRLSEQQLTRGKVKVVMEREVARGRLRRTRSGN
ITLPLRGAEEEEERKNASADRLAKSALQDEHTGGKSPPASLGEDEPMETAQEEEEEEEEE
EEEEEDPRSSDEEAGGLSPVVMTTEPELIEKPTEDVEVQTASEQQSDGWAAGLTWMCVSR
TKTPRLPVQGASPSQWSSAHLEDATVVSHQKHVKAESEMQEDRINHSASDFNNFESRAEV
GVSSCLLTPTASPRDSGMSEEPGMNGGGGGGGFMKSEGASGGLVDWTVSDVVSYFTTAGF
PEQADAFRTQEIDGKSLLLMQRSDVLTGLSIRLGPALKIYERHVKVLQKTHFEDDDC
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcccaataagtaccgagagtggatcctggaaacaatcgactctctccgctcg
aggaaagctcgtccggatttggagaggatttgtcgaatggtccggagacgacacgggtcg
gacccggaccgaaccaggaccgaactggaaaagctgattcaagagcagacggtgctcaaa
gttagctacaaggggtccatatcgtaccggaatgcggcgaaggtgcagaggaaaagcaga
aagaagagtgagttcacggccgctggcggcggcggcgcggaggcggcagcgagggagcga
accaaacgcgaccatccgaacaacaacggcgacagtgcgcacagcttcaccgatcaggag
gaggactcggagcccagcccggagccccgcactccaacaccggccagcaccggcgacacg
aagccggagcagcctgccgcctgcggcgcgagtagcggaaacgggcgcctcatgtgtggc
gcaacgacgggctgcgctgtcgggagcggctgcgaagaggagaaagcaagtgcaccgaga
gactataagggatcaggaccgcggggggtgggggactgcccgtcgcccggtctcggccac
acaacaaacgcgcgcggccgcggcggcgatgcgagcgggataacgccgagcgtcgccgac
gcggttcctgaagaaagagagccgcgtgtgtcgagagatgacaccccgaacaaaacttcc
tctgggagcgtcagccgcctcccgccagagcagcagcgacagcagcaggcggttcccctc
aagccccaacttggagtcggaggagggggcaccggcacggcggggcgccacgcgaactcc
gacctgggcgacaggctggtggcttctgttcgcagcctgtcggagaaaagcatccgaggg
ggctccgccgccgccgcggcgacacgaggccacattaagccgctcgagctgaaggagatt
ttgggctatatgagcagccatgaccggctgtcggagcagcagctgacccgaggcaaagtt
aaagtggtcatggagagagaggtggcgaggggcagactgcgcaggacccgcagcgggaac
attactcttcctctgaggggggcggaggaggaggaggagcggaagaacgcgtctgcggac
agacttgcgaagagcgcactgcaggacgagcacaccggggggaagtcgccgcccgcttct
cttggggaggatgagccgatggaaacagctcaggaggaggaggaggaggaggaggaggaa
gaggaggaggaggaggatccccggagttctgatgaggaggcgggaggactatccccggta
gtcatgacaaccgaaccagagctcattgagaaacccacagaagacgttgaggtccagacc
gcgtcagagcagcagagtgacggttgggctgctggtctcacttggatgtgtgtttcccgc
accaagacgccccgtctacctgttcagggagcttccccgtcacaatggagcagcgcccac
ctggaggacgccaccgtcgtctctcatcagaaacacgtgaaggcagaaagcgagatgcag
gaggacaggatcaaccactccgcctcagactttaacaactttgagtctagagcggaggtc
ggcgtgtcgtcctgcctgctcacgcccacagcgtctcccagagactccggcatgtctgag
gaaccagggatgaacggaggaggaggaggaggagggttcatgaagtcagagggggccagc
gggggcctcgtggactggacagtgtctgatgtggtcagctatttcacaaccgcaggtttc
cctgaacaggctgatgccttcaggacccaggaaatcgatggcaagtcccttctcctcatg
cagcgcagcgatgtgttgacgggcctgtcaatcagactcggccccgccctcaagatctat
gagcgccacgtgaaggtcctgcagaaaacacactttgaggacgacgactgttaa
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