Pseudoliparis swirei (Mariana hadal snailfish): 130190760
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Entry
130190760 CDS
T09868
Name
(RefSeq) vasorin-like
KO
K24500
vasorin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130190760
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130190760
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_EndoS
LRR_9
LRR_14
fn3
LRR_LRWD1
LRR_NXF1-5
EGF
Motif
Other DBs
NCBI-GeneID:
130190760
NCBI-ProteinID:
XP_056266319
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All DBs
Position
24:221970..234694
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AA seq
706 aa
AA seq
DB search
MKSGAMLPYVLLLFLSPGPAASSDCPADCSCLSQDSIFCIQRRSGLVPRVPAATRQLYIF
QNGIDTLTREDFQGLGDLELLDLSQNELAQIPGGAFEMLSKLKNLDLSSNHMAHISKDSF
SGLVQLERLYLHGNRIQKIDPEAFDGLEMLLELKLQGNQLSALPSLRFQRLLLLDLSHNH
IPTLGPSDLQTPHLEALKVASLGLTALDEGLIASLGNLHELDISTNQFTEVPPALKQDSL
KGLIKLSLAANPLGELRVEDLQKLSGLQELDLSGLNLQGFSQSFLQTFPRLMHLTAAENP
FNCLCPLAWFPAWLTEKEVALGRPEETRCHFPLVNAGKMLSALEHKDFGCPPTTTAMMGS
PIGSTPVPQVPTTSPDTIQTDAIPPPPPASEATASSKTDGAPSPEPPVSPSAASGELGET
GGHTCLPNICLNGGACHVDPLGPLGCLCALGTSGLYCENVDEVPETPKPSATAVSLAAPV
MPAELETLSARQVTSTSILLDLHRFIETRPHIRGIRLTYRNLSGPDRRPIILSVPATYPE
YTLRGLRPNCTYSVCASPLGERAGSRTNGSVETGSCAEARTEGLPLASSESRVEAQSPLT
YTLIPTVAALALVMGLAAVAGAIVCVRKRKRSKAGLQPGPVDPVELEGMKACLENGGNGT
LLQKPPEVDRCRAPPSVQHSGGSGRESAAMPGPPDSNGAPAKPSYF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcggcgccatgctgccgtacgtcctgctcctcttcctctctcctggcccggcg
gcgtcctctgactgcccggccgactgttcctgcctgagccaggactccatattctgcatc
cagcgacgctccggcctggtgccccgtgtgcccgccgccacccgacagctctacatcttc
cagaacggcatcgacacgttgacccgagaggacttccagggcctcggggacctggagctg
ttggatctgagccagaacgagctggcccagattccaggcggagcgtttgagatgctgtcc
aagctgaagaacttggacctgtcctccaaccacatggcccacatctccaaagacagtttt
tctgggttggtccagctggagaggctctatctccacggcaaccgcattcagaaaatcgat
ccggaagcttttgacggtttagagatgctcctggaactgaagctccaaggaaaccagctc
agcgctctgccgtcccttcgtttccagagacttctgcttctagacctcagccacaaccac
atcccaacactgggaccctcagaccttcagaccccccatctggaggcccttaaggtggcc
tcactggggcttaccgctttagatgagggcctgatcgcttctctggggaacctccatgag
ctggacatctccaccaaccagttcacggaggtgcccccggccctgaagcaggactctctc
aaggggctaatcaagctcagcctggctgccaacccattgggcgagctcagggtggaggac
ctccagaaactgagtgggcttcaagaactggatctcagtggacttaatctccaaggattt
tcccagagtttcttacagaccttcccaaggttgatgcacctgactgcagcggagaaccct
ttcaactgcctgtgcccgttggcctggttccctgcttggctgacggagaaggaagtggct
ctcgggaggcccgaggaaaccagatgtcacttcccgttagtgaatgctgggaagatgctg
tcagcgctggagcacaaggactttgggtgtccgccgaccaccaccgcgatgatgggctcc
cccattggaagtactccggttccccaggtgcccaccacatctccagataccatccagacc
gacgccattcctcctcctcctccagccagtgaggcaaccgcctcctcaaagacagacggc
gctccttcaccagaacctcccgtctcccccagcgccgccagcggggagctgggggagacg
ggggggcacacctgcctaccgaacatctgcctcaatgggggcgcctgccacgtggatcca
ctgggtccgctcggctgtctgtgtgcgttgggaacttccggtctatactgtgaaaacgtg
gacgaggttcccgagacgccgaaaccgtcagcgacggcggtttcgctcgctgcccccgtg
atgccggcggagctggagacgctcagcgcccggcaggtgacctccacgtccatcctgctg
gaccttcaccgcttcatcgagacgcggccacacatccgcggcatcaggttgacctaccgt
aacctctcggggccggaccgccggcccattatcctgagtgtcccggcgacctaccccgag
tacaccctgcgggggctgagacccaactgcacctactcggtgtgcgccagtcccctgggg
gagcgagcaggctccaggaccaacggctccgtggagaccgggtcgtgtgccgaggctcgc
accgaggggctgccgctggcgtcctcggagtcccgggtggaggcgcagagcccgctgacc
tacacgctcatccccaccgtggcggcgctggccctggtgatggggttggccgcggtggcc
ggggcgatcgtctgtgtccgaaagaggaagcggtccaaggcggggctgcagccgggcccg
gtggacccggtggagctggaggggatgaaggcctgcctggagaacgggggaaacggaaca
ctactccagaaaccgcctgaggtcgaccgctgccgcgcgccgccgtcggtgcagcacagc
gggggctcgggccgcgagtcagccgcgatgccgggaccgcccgacagcaacggagcgccc
gccaagccttcgtatttctaa
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