Pseudoliparis swirei (Mariana hadal snailfish): 130190813
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Entry
130190813 CDS
T09868
Symbol
sclt1
Name
(RefSeq) sodium channel and clathrin linker 1 isoform X1
KO
K25400
sodium channel and clathrin linker 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130190813 (sclt1)
Cilium and associated proteins [BR:
pswi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
130190813 (sclt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCCAP
Nsp1_C
DUF1664
DUF4365
Motif
Other DBs
NCBI-GeneID:
130190813
NCBI-ProteinID:
XP_056266418
LinkDB
All DBs
Position
24:complement(26412672..26432986)
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AA seq
685 aa
AA seq
DB search
MEAEVEFLRDQVNRLNSALSQYQYGQRTQTTPSQAEEARRGESPSPWLSDRSIMAPLIAE
YDRHMDEMTEQLQRYQGLMSEVKVKLERVVEENERLHAELRESVEKQLHALPVAPGMEGG
TPLEEEAIVRNLQEQVQLCEQERLQAMELWQATALELDLLQQAHRETTSDGQIHHTQRHQ
LQDQLVQFQQHTHKLQAANQQLESTSRQFLETVTEQNSEMEELHGQLRQAKAELRTATAR
LDEMTTLLQNVQDKMQRREEDVAEAQGREDAADRRLQQLQAALAQLEARLKAATHEAEAV
RRDQTVWERKVGELQAHCSALEDQKYEALAKIRESVQLAEEAALQKDQALLREKQKMEEL
EKTKEAIRQLIQEAAVRTRKEVDNVRKQCNAQIHRMAEELSALQLECADKESRIEKSLRE
RKAVEEELEKVYKEGRAEPEFRKMDALHQRCLDAERRKEDVSLTLQSTQSKLKKTEVDCG
EELQRCREEARRLQGALAAARDDCVGVSEERLLLQRENSQLCKEMGELRTTAALVQKKAR
QQLSQMEQEHSLKEHGLDARVQQLEESSLSSRVDLTRLLTAQQKVTQRWKEEAKNLVQAL
ETKITGLKAELNRQKQRSHDLEMQLETYHNSVAEYERQLVEYQEKTSRLQRRLTQAEQRA
TAATQQLSMLTSQRRKTAMVEPETL
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggaagtggagtttttacgtgatcaagtcaacagactaaattctgctctcagc
cagtatcagtatggacagcgcacacagacgacaccatctcaggctgaggaggcgagacga
ggagagtctccttcgccctggctctcggacagaagtataatggctcccctgatagcggag
tacgatcggcacatggatgaaatgaccgaacagctgcagagataccaggggctgatgtca
gaggtcaaagtgaagttggagagggtggtcgaggagaacgaaaggctccatgccgagctc
agggagtctgtggagaagcagctccacgccctgccggtggctccggggatggagggcggc
acgccgctggaggaggaggccatcgtcaggaacctccaggaacaggtccagctgtgtgag
caggagcggctgcaggccatggagctgtggcaggcgacggccctggagctggacctcctc
cagcaggcccaccgggagacaacctccgatggacagatccaccatacccagagacaccag
ctccaggatcagctcgttcagttccagcagcacacacacaaacttcaagcggccaatcag
caactggaatcgaccagccggcagtttctggagacggtgacggagcagaactctgagatg
gaggagctacacggccagctcaggcaggccaaagcggagctgaggacggccacagcccgg
ctggacgagatgaccacgttattacaaaatgtccaggacaagatgcagagacgggaggaa
gacgtggcggaggctcagggccgagaggacgcagcagaccggcgcctccagcagctccag
gcggcgttggcccagctggaggccagactcaaagcggcgactcacgaggcggaggcagtt
cggcgggatcagaccgtgtgggaaaggaaggtaggcgagctgcaggctcattgctccgcc
ctcgaggaccagaagtacgaggccctggccaaaatccgggagagcgtccagctggcggag
gaggcggcgctgcagaaggaccaggctctgctcagagagaagcagaagatggaggagctc
gagaagaccaaggaggccatcagacagctgatccaggaggctgcagtccgcaccagaaaa
gaggtggataacgtgcgtaagcagtgcaacgctcagatccaccgtatggccgaggagctg
tctgctctgcagctggagtgtgccgataaagagtctcgcattgaaaagtccctgcgagag
aggaaagccgtggaggaggagctggagaaggtttataaggagggccgggctgagcccgag
ttcaggaagatggacgcccttcaccagaggtgtctggacgcggagcggaggaaggaagac
gtgagcctcacgctgcagagcacgcagagcaaactgaagaagacggaggtggactgcggc
gaggagctgcagcgctgccgggaggaggcgcgccggctgcagggcgctctggccgcggcc
cgggacgactgcgtcggcgtcagcgaggagcgactcctgctgcagcgggagaactcgcag
ctctgcaaggagatgggcgagctgcgcacgaccgccgcgctggtccagaagaaggcccgg
caacagctctctcagatggagcaggagcacagcctgaaggagcacgggctcgatgcccgc
gtgcagcagctggaggagagcagcctgagctccagagtggatctcacgcgcctcctgacg
gcgcagcagaaagtcacccagcgctggaaagaagaagccaagaacctcgtgcaggccttg
gagactaaaatcaccgggctcaaagcggagctgaatcggcagaaacagcgttcacacgat
ctggagatgcagcttgaaacttaccacaactctgttgctgagtatgagaggcagctagtg
gagtatcaagagaagacgagtcgtctccagagacgactgacgcaagctgaacaaagggca
actgctgcgacacaacagctgagtatgttgacatcacagcgaaggaaaacagccatggtc
gaaccggagactttataa
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