KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130190886
Entry
130190886         CDS       T09868                                 
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04510  Focal adhesion
pswi04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130190886 (lamc1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130190886 (lamc1)
SSDB
Motif
Pfam: EGF_laminin Laminin_N Laminin_B EGF_LMN_ATRN EGF_Teneurin
Other DBs
NCBI-GeneID: 130190886
NCBI-ProteinID: XP_056266449
LinkDB
Position
Unknown
AA seq 1574 aa
MRATPRALLALSWLALCARAAMDECADEQQRAQRCMPEFVNAAFNVTVAATNSCGAPPEE
YCVQTGATGVTKSCHICDARDPRNQHSAAYLTDYNNQQDTTWWQSQTMLAGVQYPAAINL
TLHLGKSFDITYVRLKFHTSRPESFAIYKRTSEAGPWVPYQYYSGSCKKTYRKPGRGFIR
TGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNR
LNTCGSRSCGSEVLRSYSSPTHAGAGGKTGQARCKCYGHASECVKDGGGRLVCDCKHNTE
GDDCNVCKAFHNDRPWRRAGGESANHCLPCDCNGKSSECFFDAELYRASGHGGHCTGCAD
NTDGPNCERCLDRHHRDGGGGRCLACNCNTVGSQAPQCDPRGVCVCKPGVTGEKCDRCQA
GFHSLTEAGCRPCSCSPSGSTQECDVNSGQCRCKEHVEGFSCDRCQLGFFHLDPSNPQGC
TACFCFQHSSVCDSAEGFSAHAISSSFSRGQGSVLISDITLPMYFIAPGRFLGDQLLSYG
QNLTLRFRVDRRDTRLSAEDLVLEGAGLRVAVPLIAQGNAYPNENAQTYVFRLHDSTDYP
WRPSISHPDFQKLLHNLTAIKIRGTYSEKSAGYLDDVSLVTARRAPGEPALWVERCTCPQ
GYQGQHCEQCTLGYRRARQELGAFSACEPCNCNGHSEACNPATGACDCRDDTAGLSCERC
RDGFYGDASRGSAADCEPCPCPTGATCAVVPTSKEVVCTNCPAGTTGKRCELCDDGFFGD
PLGRAGPVRACRACKCSDNIDPNAVGNCDRETGECLKCIQHTAGFFCDRCRDGFYGNAMA
GSANHKCSACSCSPLGTVAQRPGCSQVTGQCECLPNVAQRDCAACQPGFFNLQSASGCER
CNCNPIGSTNGQCDITSGQCECQPGVTGTHCERCEVHFFGFSSSGCKPCDCDLEGSRAAQ
CQDDGRCECLRGFVGARCDMCEENFFYNRSAPGCQQCPSCYSLVRDKVNQQRQKLQDLQT
LIDQLGSGQDAVSDRAFEDRLKEAEKAIMELLEEAQASKDVDRGLLERLSGINSTLTTQW
SRLQSVRGTVDASGTQADRARLRVRDAEDLIDRARQELDKAKDAVGRVDIRPPSGAGTNN
MTRLAEEARALADRHKMEADQIEKISRDANATSSRAHDLLLATLEGESATSQEIEQLNRK
YNEAKQLAESLEQQAHKVQAEAEEAGARAVETLAVLTGVPPLDTAALEDEAGKIRKEAAD
LDKLLDKTEREYQDLRDDLRGKEHEVRRLLEKGRSEQQTADQLLARADAAKALAEEAAKK
GRSTFKEAESILEDLRDFDKRVNDNKTAAEDALKKIPAINATITAADQKTRQAEASLGNA
AADAREAKRKAEEAEKIAGGVQKGSARTKQDAEAALQDAGQLDRHVGAVMEQLDGAEREL
LRKKAEADRDATMAGMAADNAKEAEDNARKAKSAVKTVLTTITVLLDQLGHIDTVDLRRL
DQLVEAVRRAQGQVGGGQLDRKLRELSDAARTQEDLITDYDRQIREIRSDIANLNDIKDT
LPEGCFNTPSLERP
NT seq 4725 nt   +upstreamnt  +downstreamnt
atgcgcgcgacgccccgggctctgctggccctgagctggctggcgctgtgcgcgcgcgcg
gccatggacgagtgcgcggacgagcagcagcgcgcgcagcgctgcatgccggagttcgtg
aacgccgcgttcaacgtgacggtggcggccaccaacagctgcggggcgccgccggaggag
tactgcgtgcagaccggcgccaccggcgtcaccaagtcgtgccacatctgcgacgcgcgc
gacccgcggaaccagcacagcgcggcgtacctgacggactacaacaaccagcaggacacc
acctggtggcagagccagaccatgctggcgggggtccagtaccccgccgccatcaacctc
acgctgcacctgggtaaatccttcgacatcacctacgtgcggctcaagttccacaccagc
cgccccgagagcttcgccatctacaagcggaccagcgaggcgggcccctgggtgccctac
cagtactacagcggctcctgcaagaagacgtaccgcaagccgggccgcggcttcatccgc
accggggaggacgagcagcaggcgctctgcaccgacgacttcagcgacatctcgccgctc
acggggggcaacgtggccttctccacgctggagggccggcccagcgcctacaacttcgac
aacagccccgtgctgcaggactgggtgacggccaccgacatccgagtgaccctgaaccgg
ctcaacacctgtgggtcgaggtcttgtggttctgaggtcctcaggtcctactcatctccg
actcacgcgggggcagggggtaagactggccaggccaggtgtaagtgttacggccacgcc
agcgagtgtgtgaaggacggcggcgggcggctggtgtgtgactgcaaacacaacacggag
ggagacgactgcaacgtctgcaaagcgttccacaacgaccggccgtggaggagggcgggc
ggcgagagcgccaaccactgtctgccctgcgactgcaacgggaagagttctgagtgtttc
tttgacgccgagttgtaccgggcctcgggtcacgggggtcactgcaccggctgcgccgac
aacaccgacgggcccaactgtgagcgctgcctggaccggcaccaccgggacggcggcggc
ggccgctgcctggcctgcaactgcaacaccgtgggctcccaggccccccagtgtgacccc
agaggagtgtgtgtgtgtaaacccggcgtgaccggagagaagtgtgaccgctgccaggcc
gggttccacagtctgacggaggccggctgcaggccgtgttcctgctctccctctggcagc
actcaggagtgtgacgtgaactcaggacagtgtcgctgcaaagagcacgtagagggcttc
agctgcgacaggtgtcagctgggcttcttccacctggacccctccaaccctcagggctgc
accgcctgcttctgcttccagcactcgtcggtgtgcgacagcgccgagggcttcagcgcg
cacgccatcagctcctccttctccagaggacagggaagtgtcctcatctcagacatcaca
ctccccatgtacttcatcgccccaggccggttcctgggggaccagctgctgagctacggt
cagaacctgaccctgaggttccgggtggaccggcgggacacgcggctgtcggcggaggat
ctggtcctggagggcgccggcctcagggtggcggtgcccctcatcgctcagggcaacgcc
taccccaacgagaacgcgcagacatacgtgttcaggctccatgacagcactgactacccc
tggaggccgagcatcagccacccagacttccagaagctgctccacaacctgacggccatc
aagatccgaggcacctacagcgagaagagtgccggttaccttgacgacgtctccttggta
acggccaggcgggctccaggtgagccggccctctgggtggagcgctgcacctgtcctcag
ggttaccaggggcaacactgtgagcagtgcactctgggatatcggcgagcccgacaggag
ctcggagccttcagcgcctgtgagccctgcaactgcaacgggcacagcgaggcctgcaac
cccgccacgggagcgtgtgactgtcgtgacgacacggccggcctcagttgtgagcgctgt
agagacggtttctatggcgacgccagccgcgggtcggcagccgactgcgagccgtgtccg
tgtccgaccggagcgacctgcgccgtagtgcccacgagcaaagaggtggtgtgcaccaac
tgccccgcaggaaccacagggaagcgctgtgagctctgtgacgacgggttcttcggcgac
cctctgggccgggccgggccggtccgggcctgccgggcctgcaagtgcagcgacaacatc
gacccgaacgccgtggggaactgcgaccgcgagaccggcgagtgcctgaagtgcatccag
cacacggccggcttcttctgcgaccgctgcagggacggtttctacggcaacgccatggcc
ggcagcgccaaccacaagtgcagcgcctgctcctgctcgccgttgggcacggtggcccag
cggcccggctgctctcaggtcaccggtcagtgcgagtgcctccccaacgtggctcagcgt
gactgcgccgcctgccagcccggcttcttcaacctgcagagcgccagcggctgtgagcgg
tgcaactgcaatccgattggctccaccaacggtcagtgtgacatcacgtcggggcagtgc
gagtgtcagcccggcgtcaccgggacgcactgcgagcgctgcgaggtccacttcttcggc
ttcagctcgtccggatgcaaaccctgtgactgtgaccttgagggctcgcgggccgctcag
tgccaggatgacgggcgctgcgagtgcctccgtggcttcgtgggcgctcgctgtgacatg
tgtgaggagaacttcttctacaaccgctcggccccgggctgccagcagtgcccgtcctgc
tacagcctggtccgggacaaggtgaaccagcagaggcagaagctccaggacctgcagacc
ctgatcgaccagctgggctcgggccaggacgccgtcagcgaccgcgccttcgaggaccgg
ctgaaggaggcggagaaggccatcatggagctgctggaggaggcgcaggccagcaaagac
gtggaccgcggcctgctggagcgcctgagcggcatcaacagcactctgaccacgcagtgg
agccggctgcagagcgtccgcggcacggtggacgccagcggcacgcaggccgaccgcgcc
cgcctccgggtccgcgacgccgaggacctgatcgaccgcgcccgccaggagctggacaag
gccaaggacgccgtgggcagagtggacatcagaccgccgagcggcgccgggaccaacaac
atgacgcggctggccgaggaggcccgggcgctggccgacaggcacaagatggaggccgac
cagatcgagaagatctcgcgcgacgccaacgccacgtcgagccgcgcccacgacctgctg
ctggcgacgctggagggcgagagcgccacgagccaggagatcgagcagctcaacaggaag
tacaacgaggccaagcagctggccgagagcctggagcagcaggcccacaaggtccaggcg
gaggccgaggaggccggggcccgcgccgtggagacgctggcggtgctgaccggcgtcccg
ccgctggacacggcggcgctggaggacgaggccgggaagatcaggaaggaggcggcggac
ctggacaagctgctggacaagacggagcgcgagtaccaagacctgcgagacgacctgcgg
ggcaaagagcacgaggtgcgcaggctgctggagaaggggaggagcgagcagcagactgct
gatcagctattggctcgagccgacgctgccaaagctctggctgaggaggcggcgaagaag
ggccggtcgacctttaaggaggccgagagcatcctggaggacctgagggacttcgacaag
cgggtcaacgacaacaagacggcggcggaggacgcgctgaagaagatccccgccatcaac
gccaccatcacggccgccgaccagaagacgcggcaggcggaggcgtcgctcggcaacgcg
gccgccgacgcccgggaggccaagcgcaaggcggaggaggcggagaagatcgccggcggc
gtgcagaagggctccgccaggaccaagcaggacgccgaggcggcgctgcaggacgccggc
cagctggaccgccacgtgggcgccgtgatggagcagctggacggcgccgagcgggagctg
ctgcgcaagaaggccgaggccgaccgcgacgccacgatggcgggaatggcggcggacaac
gccaaggaggccgaggacaacgcccgcaaggccaagagcgccgtgaagacggtgctgacc
accatcaccgtgctgctggaccagctgggtcacattgacacggtggacctgcgccgcctg
gaccagctggtggaggccgtgcggcgcgctcagggccaggtgggcggcggccagctggac
aggaagctgcgtgagctgagcgacgcggcgcggacgcaggaggacctgatcaccgactac
gaccggcagatccgggagatccgctccgacatcgccaacctcaacgacatcaaggacacg
ctgcccgagggctgcttcaacacgccgtccctggagcggccctag

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