Pseudoliparis swirei (Mariana hadal snailfish): 130190975
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Entry
130190975 CDS
T09868
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130190975 (zeb1a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
130190975 (zeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_15
Homeodomain
Motif
Other DBs
NCBI-GeneID:
130190975
NCBI-ProteinID:
XP_056266617
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MADGPRCKRRKQANPKRSSVTDFNSGLEASSDSDDEDKLHIVEEENLQEAEAANAAGTRA
PAGHGAAAKTTAAKNAAKNATVTVLPLNGSLNGVKEEYVSEEEEEEAEEKDALVDEILQQ
GDTAVIYPEAPEDEHSPAEMGGADENGTPDSFSQLHTCPYCSRGYKRNASLKEHIKYRHE
TSEDNYSCTHCSYTFTYRSQLERHMSHHRGTREQRHVSQSTGGGGSGGISGNRKFKCTEC
CKAFKYKHHLKEHLRIHSGEKPYECSNCKKRFSHSGSYSSHISSKKCVGAAAPPNGAPRA
SIKSPPPAAQTAPAAIAPARVILKEKADSKPLQEQLPVTQIKSEPVEYECKPAMAAPAHV
PQSVVASVGGLPQGVAMVVPTVGLMSPISINLSDLQNVLKVAMDGNVLRQVLGTANGVVA
QGKQGFVVQQPQQQIISLPAFVDHDGTTKIIINYSIGPAAGATMHTAAFIARTNPAPLPM
VTAAPTPTKTDKPSTPGVTDLSVVKTEPETVAVTAAGVARPRSTPKVSGTGACTLCDDCP
DNLEALHLLQHLKAANGEAVDSAALDPSFAALLSEAGVTLEEPPVDDLLSLLRAYFASNA
DPGERELTEISESVRVHVDVVRKWFAKMNSGRNAGGGRRGKATAVAKNAVSGDASRETSD
KASSESGGSPSDSSPLSLNAGDLVIIKSEPEDPMDSQAEPLDLSFPKHAAAALEKAAPPP
AKQQEQPLNLTCLRKEQLDGRTIYVAAAAPRGGAPVSIVSAAQLPTLVAIAGQGCLNGAA
KRTILIPQLTYTYAAVAGSATGAKTVVLNGHKQEKRPDVSPADEQSDSDSPALMKKRRLD
NGVYPCDLCSKVFQKGSSLLRHKYEHTGKRPHECPVCKKAFKHKHHLIEHSRLHSGEKPY
QCDKCGKRFSHSGSYSQHMNHRYSYCKKDGPGSGSGSGAEPELGVRSELGSPGAGLRSDS
RTTSPPSQLDSDERESGEEDEEEEEEAMCMDDIRVVQVDDDECEIYEGNFEEEEEEGEGE
EMLEEDATGEEEVEGEKEDEKVACDVMEVEKRDGEVGDGEVGDATEEKKEASDMEKEEEE
EMPDCEANTDKSAREESGGGEPSEEETNAK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaaacaggccaacccgaagcggagcagcgtg
acagactttaacagcggcctggaggccagctcggactcggacgacgaggacaagctgcac
atcgtggaggaggagaacctccaggaggccgaggccgccaacgccgccgggaccagagcg
ccggccggccatggcgccgccgccaaaacaaccgccgccaaaaacgccgccaaaaacgcc
accgtcacagtattacccctcaacggctccttgaacggagtgaaggaggagtacgtgtca
gaagaagaggaagaggaggccgaggagaaggatgccctggtggacgagatcctccagcag
ggggacacggccgtcatctatcccgaagccccggaggacgagcacagtccggcggagatg
ggcggcgccgacgaaaacggcacgccggactccttctcccagctgcacacctgcccctac
tgctcccggggctacaagcgcaacgcctcgctgaaggagcacatcaagtatcgccacgag
accagcgaggacaactacagctgcacgcactgcagctacaccttcacctaccgctcgcag
ctggagaggcacatgagccaccaccggggcacccgggagcagcgccacgtctcccagtcc
accggcggcggcggctcaggaggaatcagtggaaaccgcaagttcaagtgcaccgaatgc
tgcaaggccttcaagtacaagcaccacctgaaggagcacctgcgcatccacagcggcgag
aaaccgtacgagtgctcaaactgcaagaagcgcttctcccactccggctcctacagctcc
cacatcagcagcaagaagtgcgtgggggcggcggcgcctcccaacggcgctccccgagcg
tcgatcaaatccccgccgcccgccgcccagaccgcgccggccgccatcgctccggcccgc
gtgatcctcaaggagaaggccgacagcaagcccctccaggagcagctccccgtcacccag
atcaaatctgagcccgtggaatacgagtgcaagcccgcgatggcggcgccggcgcacgta
ccgcagtccgtggttgcgtcggtggggggcctcccccagggcgtggccatggtcgtgccg
acggtgggcctcatgtcgcccatcagcatcaacctgagcgacttgcagaacgtgctcaag
gtggcgatggacggcaacgtgctgcggcaggtgctcggcacggccaacggcgtggtggcg
cagggcaagcagggcttcgtggtgcagcagccgcagcagcagatcatcagcctgccggcg
ttcgtggaccacgacggcaccacgaagatcatcatcaactacagcatcggcccggcggcc
ggcgccacgatgcacaccgccgcgttcatcgccagaaccaatcccgccccgctccccatg
gtcaccgcggcgcccacgcccaccaagaccgacaaaccctcaaccccgggggtgaccgac
ctctccgtcgtgaagacggagccggaaacggtggccgtcacggcggcgggggtcgcgcgg
ccgcgatcgaccccgaaggtctccggcaccggcgcgtgcacgctgtgcgacgactgcccc
gacaacctggaggcgctgcacctgctgcagcacctcaaggcggccaacggcgaggcggtg
gactccgccgccctggacccgtcgttcgccgctctgctcagcgaggccggcgtgacgctg
gaggagccgccggtggacgacctcctctcgctcctcagggcctacttcgcctccaacgcc
gaccccggcgagcgggagctgaccgagatctcggagtccgtccgcgtccacgtggacgtg
gtccggaagtggttcgcgaagatgaactcggggaggaacgcgggcggcggccgccgcgga
aaagccacggcggtggcaaagaacgccgtctcgggggacgcctcccgggagacgtccgac
aaagcctcgtcagaatccggcggttccccgtcggactcctcgccgctgagcctcaacgcc
ggcgacctcgtcatcattaagagcgagccggaagacccgatggactcccaggccgagccg
ctcgacctctcgttcccgaagcacgcggcggcggcgttggagaaggccgcgcctcctccc
gccaagcagcaggagcagcccctgaacctgacctgcctgaggaaggagcagctggacggt
cgcaccatctacgtcgccgccgccgcgcctcggggcggagcgcccgtgagcatcgtctcc
gccgcgcagctgcccacgctggtggccatcgccgggcagggctgcctcaacggcgccgcc
aagcgcaccatcctcatcccccagctcacgtacacctacgccgccgtggccggcagcgcc
acgggggcgaagacggtcgtactgaacggccacaagcaggagaagaggccggacgtgtcg
ccggcggacgagcagagcgactcggattcgccggcgctgatgaagaagcggcggctggac
aacggcgtgtacccgtgtgacctctgctccaaagtcttccagaagggcagctcgctgctc
aggcacaaatatgaacacacagggaaacgcccccacgagtgccccgtctgcaagaaggcc
ttcaagcacaagcaccacctgatcgagcactcgcggctgcactccggggagaaaccctac
cagtgcgacaagtgcgggaagcgcttctcccactccggctcctactcccagcacatgaac
caccgctactcgtactgcaagaaggacgggccgggctccgggtccggctcgggggcggag
ccggagctcggcgttcggtcggagcttggcagccccggcgccggactgcgctcggacagc
cggaccacgagcccgccctcccaactggactcggacgagagggagagcggcgaggaggac
gaggaggaggaagaggaggccatgtgcatggacgacatccgggtggtgcaggtggacgac
gatgagtgtgagatctacgagggtaactttgaggaggaggaagaggaaggggaaggggag
gagatgttagaggaagacgcgactggagaggaagaggtggagggggaaaaggaggacgag
aaggtcgcctgtgatgtgatggaggtcgagaagagagacggagaggtgggagacggagag
gtgggtgacgcgacggaagaaaagaaggaggcgagcgacatggagaaagaggaggaggag
gagatgccagactgtgaagctaatacggacaaaagcgcccgggaggagtcgggcggcggc
gaaccctcagaggaggaaacaaacgccaaataa
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integrated database retrieval system
