Pseudoliparis swirei (Mariana hadal snailfish): 130190986
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Entry
130190986 CDS
T09868
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130190986 (ncstn)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
130190986
NCBI-ProteinID:
XP_056266639
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All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MDLLSSKWLVNLLVCCLFVAVGGSSVEKKIYVNLNYTVPCVRLLNATHQIGCQSHLSGNV
GVLHVLESEEDLDWVLTSGLTPPYLVILESSLFTRSVMMKLKSGSGRVAGVAVVTPSANP
SRGSSPHTSCPNENTGVYTDAYDPAMARCNVTLWNPLGSGLSYEAFDFPIFSMKDDNDTQ
VIQQCYMDHNRASNGSAPRYPLCAMQLYSHMSAVTDTATCMRRNDINLSLSPAEMVCDPL
GDFNVWGSTRPLNNTAKGHKQGESLVLAAARLDSRSFFFDVAPGAESGASGFIALLAAAH
ALRNATQEAPPPRNILYAFFHGETFDYIGSSRMVFDMQQKNFAVDLDNVHSVLEVGQVGL
RADSKLWLHSDPVSRKNDSVNDEVKQLILRLRSASAGLGLSVEEPGFSQPLPPSSFQRFL
RARPIPGVVIEDHRSAFTNSFYESMYDNADYLNISYPPDLTPEEQLEFVTDTAKALTEVA
TMVARTLFTQAGGEESQQSSINADPQMVTRILYGFLVRSNNSWFQQLVPSDLMSHLTDGP
TNFYVGVATQTSKPTLLVQLLLANLSGSTVNVSRDDCQNQRLDGQDTQSKHLHSFLWVQG
AAPPNSTERAGFCTRSTARLSKALSPAFDLQDFTSTEYSTWTESRWKTIKGRIFLVASHD
LEMLTLGVGVAVLLASLMLTYAMSSKADVLFSSGREPANATY
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggatctgctgtcgagcaaatggctcgttaatctgctagtttgttgcctcttcgtcgcc
gtcggcggtagttcggtggaaaagaagatctacgtgaacctgaactacaccgtcccgtgt
gtgcggctgctcaacgccacgcaccagatcggctgccagtcccatttgtccggtaacgtg
ggcgtgctccatgtgctggagtccgaggaagacctggactgggtcctgacctctggcctc
acgcctccatacctggttatcctggagtcgtcgctctttaccagatccgtcatgatgaag
ctgaagagcggctcaggcagggtggcgggcgtcgccgtggtgacgccgagcgccaacccg
tcccggggctcctccccccacaccagctgccccaacgagaacacgggcgtgtacacggac
gcctacgaccccgccatggcccgctgcaacgtgacgctgtggaacccgctgggcagcggc
ttgtcctacgaggccttcgacttccccatcttcagcatgaaggacgacaacgacacgcag
gtcatacaacagtgctacatggatcacaaccgggcctccaacggcagcgccccccgctac
ccgctgtgcgccatgcagctctactcacacatgtcggccgtcacggacacggccacctgc
atgcggaggaacgacatcaacttaagcctcagcccggccgaaatggtttgcgacccgctg
ggagacttcaacgtctgggggtccacgaggcccctgaacaacacggccaagggccacaag
cagggggagagcctggtgctggcagcagccaggttggacagccgctctttcttcttcgac
gtggctcccggagcagagagcggcgcctccggcttcatcgctttgctggcggccgctcac
gctctgaggaacgccacccaggaggctccgcccccacgcaacatcctctacgccttcttt
cacggggaaaccttcgactacatcggcagctccaggatggtgttcgacatgcagcagaag
aactttgcagtggatctggacaacgtgcactcggtgctggaggtcggacaggtcgggctg
cgggccgactccaaactgtggcttcactccgacccggtgtcccgcaagaacgacagcgtc
aacgacgaggtgaagcagctgatcctccgcctgcggtcggcctccgccggcctcggccta
tcggtggaggagcccggcttctctcagcccctccccccctcgtccttccagcgcttcctg
agagctcggccgatccccggggtcgtcatcgaggaccaccgctccgctttcaccaacagc
ttctacgagagcatgtacgataacgccgactacctgaacatctcttaccctcccgacctg
acgccggaggagcagctggagttcgtcacggacacggcgaaggctctaaccgaggtggcc
accatggtcgcccggactctgttcacccaggcaggaggagaggagagccagcagagcagc
atcaacgccgacccgcagatggtgacccggatcctgtacgggttcctggtccgctccaac
aactcctggttccagcagctggtcccctcggacctcatgagccacctgacggacgggccc
actaacttctacgtgggcgtggccacgcagaccagcaagcccaccctgctggtgcagctg
ctgctggccaacctgagcggcagcaccgtgaacgtcagccgggacgactgccagaaccag
aggctggacggccaggacacgcagagcaagcacctgcactccttcctgtgggtccagggc
gcggcgccgcccaacagcaccgagcgggccggcttctgcacgcgctccacggcgcgcctc
tccaaggcgctgtcgccggccttcgacctgcaggacttcacctccacggagtactccacc
tggaccgagtcccgctggaagaccatcaagggccgcatcttcctggtggccagccacgac
ctggagatgttgacgctcggcgtgggcgtcgccgtgctgctggcgtctctgatgctgacg
tacgccatgagctccaaggccgacgtcctcttcagctcggggcgggagcccgccaacgcc
acctactga
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