Pseudoliparis swirei (Mariana hadal snailfish): 130191211
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Entry
130191211 CDS
T09868
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130191211
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pswi01007
]
130191211
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130191211
Enzymes [BR:
pswi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
130191211
Amino acid related enzymes [BR:
pswi01007
]
Aminoacyl-tRNA synthetase
Class I (G)
130191211
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130191211
Prokaryotic type
130191211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
130191211
NCBI-ProteinID:
XP_056266842
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MTDCHGDGEGDKSPLEIYEQLAAQGDEVRVLKNAKAEEAEIAAAVQMLQKMKVNYKQLTG
QDYKAGCPPSDDSVAPDNRPAADGANNEDTVDPWNVSTDSAKGVDYDKLIVRFGSSKIDM
ELVDRIEKVSGQKPHHFLRRGVFFSHRDMHQVLDAYEKHKSFYLYTGRGPSSEAMHVGHL
IPFIFTKWLQDAFDIPLVIQLTDDEKYLWKDLTLEECHRFAVENAKDIIACGFDVNKTFI
FSDLEYMGASPEFYRNVVKVQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSSSFP
QIFKGRTDVQCLIPCAIDQDPYFRMTRDVAPRIGYTKPALLHSTFFPALQGAQTKMSASD
ANTSIFLTDTPKQIKNKVNKHAFSGGKDTVEEHRKYGGNPDIDVAFMYLTFFLEDDEQLE
KIRQDYLSGALLTGELKKLLIETLQPIILQHQERRKQVTAETVKEFMTPRPLNFNL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgacagactgtcatggagatggcgaaggagacaaaagtcctctggagatctacgagcag
ctggcagctcaaggagacgaagtcagggtcttgaaaaacgcgaaagcagaggaagctgaa
attgctgctgctgtccagatgctgcaaaagatgaaagtaaactacaaacagttgacgggt
caggattacaaagcaggctgtccgccctcagacgactctgttgcccctgacaacaggcca
gcagcagatggggcgaacaacgaagacactgttgacccatggaacgtttccaccgacagc
gccaagggagtggattacgacaaactcatcgtgaggtttggcagcagtaaaattgacatg
gagctggtggacagaatagaaaaggtatcgggacagaagccgcaccactttctacgcaga
ggggttttcttctcgcacagagatatgcatcaggtgcttgatgcgtatgagaagcacaag
tccttctacctttacactggcagaggtccgtcgtcagaggccatgcatgtcggtcacctc
atccccttcatcttcaccaaatggttgcaggatgcatttgacattcctctggtgatccag
ttgacggacgatgagaagtatctgtggaaggatctaacactagaagagtgccaccgcttt
gctgtggaaaatgcaaaggacatcattgcctgcggctttgatgtgaacaaaaccttcatc
ttctctgacctcgaatacatgggagcatcccctgaattctacagaaatgtggtgaaggtc
cagaaacatgtgacgttcaaccaggtcaaaggcatctttggatttaccgacagcgactgc
atcgggaagatcagcttcccagccatccaggcagccccatctttcagcagctcgttccca
cagatctttaaaggcagaacggatgttcagtgtctcatcccctgtgcaatagaccaggac
ccctacttcaggatgacccgtgatgtcgctccaaggatcggctacaccaaaccagccctg
ctgcactccaccttcttcccagccctgcagggggcgcagaccaagatgagcgccagtgat
gccaacacctcgatcttcctcactgacactcccaagcagatcaaaaacaaggtcaacaaa
catgccttttcgggaggaaaagacacagtggaagagcacaggaagtatggtggaaaccca
gatatagacgttgccttcatgtacctgaccttcttcctggaggatgatgaacagctggag
aagatcagacaggattacctcagtggagctcttctcacgggagaactgaagaagcttttg
attgagacgctgcagccgatcattctgcaacatcaagagcgacgcaaacaagtcacagcc
gagacagtcaaagagttcatgacccccaggcctttaaactttaacttatag
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