Pseudoliparis swirei (Mariana hadal snailfish): 130191239
Help
Entry
130191239 CDS
T09868
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04517
IgSF CAM signaling
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130191239
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130191239
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130191239
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130191239
Intermediate filaments
Intermediate filament-binding proteins
130191239
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
Motif
Other DBs
NCBI-GeneID:
130191239
NCBI-ProteinID:
XP_056266874
LinkDB
All DBs
Position
Unknown
AA seq
1927 aa
AA seq
DB search
MLLKLLEVLAGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGCHDIVDGSHRLT
LGLVWTIILRFQIQDIRVETDDNKEKRSAKDALMLWCQMKTAGYSNVNIRNFSTSWRDGL
AFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLGEQHLGLTPLLDPEDISVDHPDEKSV
ITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETELMVGRYESLASDLLEWIQQTVVILN
NRKFSNSLVGVQQQLQAFNTYRTAEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPREG
TLLSDINKAWERLEKAEHERELALRAELIRQEKLEQLARRFDRKAAMRETWLSENQRLVS
QDNFGFDLQAVDAATKKHEAIETDIAAYEERVSAVVSVARELEAEQYHDIKRITARKDNV
IRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDL
LQKHTLVEADISIQADRVKAVGTNATKYSIGDAGYKPCDPQVIQGRVSHLEFCYQELTQL
AAERRAHLEESRRLWKFFWEMAEEEGWICEKEQILSSVERGKDLTGVLRLLSQHRALEDE
MSGRAGHLKHSVAEGQVMVQTDHFAAARIQERIDDLQAQWAALERLAALRRRRLEEALAL
HQFQADADDVDALTLDALRIVSSGETGHDEFSTLALFRKHKDAAAEVASYRPVIDSLREQ
AASLPREEAESEEVRGRLAGIEERHKEVTALTKLRKQALQDALALYKMFSEVNACEVWID
EKEQWLNSMEIPEKLEDLEVVQHRFESLEPEMNNQASRVAVVNQIARQLMHNGHPSEKDI
IKTQQDKLNNRWSQFRDLLDQKKESLNSALGVQNYHLDCNETKSWIKEKTKVIESTQELG
NDLTGVMALQRKLTGMERDLAAIEDKLGGLRGEAQQLAEEHPDQAKAITGRLAETTGVWE
EMKNTLKTREESLGEARKLQQFLRELDDFQSWLSRTQTAIASEDMANTLAEAEKLMAQHQ
GIKNEIQNYEEDYQKMRDMGDMVTRGQTDAQHMFLHQRLQALDTGWNELHKMWENRQKLL
SQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPATLQGAEAAIKKQEDFMTTMDANEDKI
NGVVEAGRRLAGTGNINGERIQERVASIDDRHKKNREAAVELLMRLKDNRDLQKFLQDCQ
ELSLWINEKMLTAQDMTYDEARNLHSKWLKHQAFMAELQANKEWLDKNQKDGMLLVSEKP
ETEAVVKEKMAALHAMWEELESTTQTKAQCLFDANKSELFTQSCADLDKWMGGLEGQIQS
EDHGNDLTSVNILLKKQQMLEKQVEVRQKEVVELQTQVKALGQEGKDPEEVDGRRQLVEM
KFQELLEPLRQRKNVLVESREVYQFNRDVEDEILWVQERMAVATSSDHGHNLQTVQLLIK
KNQTLQKEVQGHQPRINGILQRSQSLLKDETRRRQADLQQLWGRLTEEVELRHGRLEEAH
KAQQYYFDAAEAEAWMSEQELYMMSEEKAKDELSAVTMQKKHQIVEQAVEDYAETVHQLS
KTSRGLVAHGHPESERISMRQSQVDKLYAGLKDLSEERRGKLDERLRLFQLNREVDDLEQ
WIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDAVNRLADELINAGHGD
AATVAEWKDGLNEAWADLLELIDTRTQILAASFELHKFYQDAKEILGRVLDKQQKLPEEA
GRDQNTVDALQRMHSTFQHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQRRESEVLEA
WRGLLEACDGRRLRLLDTGDKFRFFSMVRDLLLWMDDVIRLIEAQENPRDVSSVELLMNN
HQGTKAEVDARNHSFSSCIELGKSLLARRHYASEEIKEKLLQLTDKRKEMIDKWEDRWEW
LRLSKTH
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgaagctgctggaggtgctggcaggggagaggctgcctaagcccactaagggc
cggatgcgtatccactgcctggagaacgtggacaaggctctccagttcctgaaggagcag
cgcgtccacctggagaacatgggctgccacgacatcgtggacggcagccaccgcctcacg
ctgggcctcgtgtggaccatcatcctgcgcttccagatccaggacatcagggtggagacc
gacgacaacaaagagaaacgatccgctaaagacgccttaatgctgtggtgccagatgaag
accgccggatattccaacgtgaacattcgtaacttcagcaccagctggagggacgggctg
gccttcaacgccctgatccacaagcaccgacctgatttgatcgactttgacaaactgaag
aaatccaacgctcactacaacctgcagaacgccttcaacctgggggagcagcacctgggc
ctgacccccctgctggaccccgaggatatcagcgtggaccatccggatgagaagtcggtc
atcacctacgtggtgacctactaccactacttctccaagatgaaggccctgaaggtcgag
ggcaaacgcatcgggaaggtgctggacaatgccatcgagacggagctgatggtggggcgg
tacgagtctctggcctcagacctgctggagtggatccagcagaccgtcgtgatcctcaac
aacaggaagttctccaactctctggtgggagtgcagcagcagcttcaggccttcaacacc
taccgcacggcggagaaaccccccaagttcacagagaaggggaacctggaggttctcctg
ttcaccatccagagcaagatgagagccaacaaccagaaggtctacatgccgcgggaggga
acgctgctctcagacatcaacaaggcctgggagcgcctggagaaggcggagcacgagagg
gagctggctctgagggcggagctgattcgtcaagagaaactggaacaactcgccagacgc
ttcgaccgcaaggcggccatgagagagacctggctgagtgagaaccagaggctggtgtcg
caggacaactttgggtttgacctccaggccgtggacgcggccaccaagaagcacgaggcg
atagagacggacatcgcggcgtacgaggagcgcgtctcggccgtggtctccgtggccagg
gagctggaggcggagcaataccacgacatcaaacgcatcacggccaggaaggacaacgtg
atccggctgtgggagtacctgctggagctgctgaaggcccgcaggcagagactggagatg
aacctgggcctgcagagagtgttccaggagatgctctacatcatggactggatggacgag
atgaagatgttgctgctgtctcaggattatgggaaacacctgctgggcgtggaggacctg
cttcagaaacacaccctggtggaggcagacatctccatccaggctgaccgggtgaaggca
gtcggcaccaacgccaccaagtactccatcggcgacgccggctacaagccctgcgaccct
caggtcatccagggccgcgtctcccacctggagttctgctaccaggagctcacccagctc
gccgctgagcgccgcgcccacctggaggagtcccgccgtctctggaagttcttctgggag
atggctgaagaggaaggctggatctgtgagaaggagcagatcctgtcctccgtggagcgc
ggcaaggacctgacgggggtgctccgcctcctcagccagcaccgcgccctcgaggacgag
atgagcggccgcgccggccacctcaagcactccgttgcagagggccaggtcatggtgcag
accgaccacttcgccgccgcccggatccaggagcgcatcgacgacctgcaggctcagtgg
gcggcgctggagcggctggcggcgctgaggaggaggaggctggaggaggcgctggcgctg
caccagttccaggccgatgcggacgatgtcgacgccttgacgctggacgccctgcgtatc
gtctccagcggagagacgggccatgatgagttctccaccctggccctcttcaggaagcac
aaggatgcggcggcagaggtggccagctaccggccggtcatcgactcgctccgcgagcag
gcggcctcgctgcctcgagaggaggccgagtcagaggaggtgcgtggacgtctggctggc
atcgaggagcgccacaaggaggtcacggcgctgaccaagctgaggaagcaggcgctgcaa
gatgccctggcactctacaaaatgttcagcgaggtcaacgcctgcgaggtctggatcgac
gagaaggagcagtggctcaacagcatggagatcccagagaagttggaggaccttgaagtg
gtccagcacaggtttgagagtctggagccggagatgaacaaccaggcatctcgtgttgct
gtggtgaaccagatcgctcggcagctgatgcacaacggccacccgagtgaaaaggacatc
atcaaaacccagcaggacaaactcaacaacaggtggagccagttccgagatctgttagac
cagaagaaagagtccctgaactcggctctgggtgtgcagaactaccacctcgactgcaac
gagaccaagtcctggatcaaagagaagaccaaagtcatcgagtccacccaggagctgggt
aacgacctcactggcgtcatggccctgcagcgcaagctgaccggtatggagcgtgacctg
gctgccatcgaggacaagctgggcggcctgcggggcgaagcccagcagctggcagaggag
caccccgaccaggcaaaggccatcaccggccggctggctgagaccaccggcgtctgggag
gaaatgaagaacactctgaagacccgcgaggagtcactgggcgaggccaggaagctgcag
cagtttttgcgcgagctggatgacttccagtcgtggctgtctcgcactcagacagccatc
gcctcggaggacatggccaacacgctggccgaggccgagaagctcatggcccagcaccaa
ggcatcaagaacgagatccagaactacgaagaggactaccagaagatgcgggacatgggg
gacatggtgacgcggggccagacggacgcacagcacatgttccttcatcagaggctgcag
gcgctcgacaccggctggaacgagctgcacaagatgtgggagaaccgacagaagctgctg
tcccagtcccatgcctaccagctgttcctcagggacaccaagcaggcagaggccttcctc
aacaaccaggagtacgtcctggctcataccgagatgcccgccacgctccagggcgcggag
gccgccattaagaagcaggaggacttcatgaccaccatggatgccaacgaagacaagatc
aacggcgtggtggaggccggccggcggctggccggcaccggaaacatcaacggcgagcgc
atccaggagagagtcgcttccatcgacgacagacacaagaagaaccgggaggctgcggtg
gagctgctcatgaggctgaaggacaacagagacctgcagaagttcctgcaggactgccag
gagctgtctctgtggatcaatgagaagatgctcacggcccaggacatgacctacgacgag
gccaggaacctgcacagcaagtggctgaagcaccaggccttcatggccgagctgcaggcc
aacaaggagtggctggacaagaaccagaaggacgggatgctgctggtgtccgagaagccg
gagacggaggcggtggtgaaggagaagatggcggcactgcacgccatgtgggaggagcta
gagtcgaccacgcagaccaaagctcagtgtctgttcgacgccaacaagtcggagctgttc
acgcagagctgcgccgacctggacaagtggatgggaggcctggagggtcagatccagtcc
gaggaccacggcaatgacctgacctccgtcaacatcctgctgaagaagcaacagatgctg
gagaagcaggtggaggtgcggcagaaggaggtggtggagctgcagacccaggtgaaggct
ctggggcaggaggggaaggacccggaggaggtagacgggcggaggcagctggtggagatg
aagttccaggagctgctggagccgcttcgccagcgcaagaacgtcctggtggagtcgaga
gaagtttaccagttcaaccgagacgtggaagacgagattctgtgggttcaggagaggatg
gccgtcgccacatcctctgaccacggacacaacctgcagacggtccagctgctcatcaag
aagaaccagaccctgcagaaggaggtccagggccaccagcctcgtatcaacggcatcctg
cagcgcagccagagcctcttgaaggacgagacccggcggcgccaggccgacctgcagcag
ctgtgggggcggctgacggaggaggtggagcttcggcacggccggctggaggaggcgcac
aaagcccagcagtactactttgacgccgccgaggccgaggcctggatgagcgagcaggag
ctgtacatgatgtcagaggagaaggccaaggacgagctgagcgccgtcaccatgcagaag
aagcaccagatcgtggagcaggcggtggaggactacgccgagacggtccaccagctgtcc
aagaccagcagaggcctggtggcccacgggcaccccgagagtgagcgaatcagcatgcgt
caatcccaggtggataagttgtacgctggcctgaaggacctatcagaggagaggcggggc
aaactggacgagaggctccgcctcttccagctgaaccgggaggtggacgacctggagcag
tggatcgctgagcgggaggtggtggccgggtctcacgagctggggcaggactacgagcac
gtgacgatgttgcaggagcgtttccgtgagtttgctcgggacaccgggaacatcggccaa
gagcgcgtggacgccgtcaaccgcctggcggacgagctgatcaacgccggccacggcgac
gcggccacggtggcggagtggaaggacgggctgaacgaggcctgggccgacctgctggag
ctcatcgacaccaggacgcagatcctagccgcctccttcgagctccacaagttctaccag
gacgccaaggagatcctgggccgcgtgctggacaagcagcagaagctgccggaggaggcg
ggccgcgaccagaacacggtggacgcgctgcagaggatgcacagcaccttccaacacgac
atccaggccctggggacgcaggtgaggcagctgcaggaggacgcggtgcgcctgcagtcg
gcgtatgccggagacaaagccgacgacatccagcggcgggagagcgaggtgctggaggcc
tggaggggtctgctggaggcctgcgatggacgcaggctccgcctcctcgacaccggagac
aagttcaggttcttcagcatggtccgagacctcctgctgtggatggacgacgtgatccgg
cttatcgaggcccaggagaatcccagagacgtgtcgtcggtggagctgctgatgaacaac
caccagggcaccaaggccgaggtcgacgcccggaaccacagcttcagctcctgcatcgag
ctgggaaagagcctgctggcccgcaggcactacgcctcggaggagatcaaggagaagctg
ctgcagctgacggacaagaggaaggagatgatcgacaagtgggaggaccgatgggagtgg
ctccgcctcagtaagactcactga
DBGET
integrated database retrieval system
