Pseudoliparis swirei (Mariana hadal snailfish): 130191269
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Entry
130191269 CDS
T09868
Name
(RefSeq) RNA-binding protein Musashi homolog 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130191269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130191269
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130191269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
130191269
NCBI-ProteinID:
XP_056266923
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MDLLLLSRHATKAPELQRAEPRRAAGKQLQRAAWRKRLATCKGRGEGRAEAGLRESEGEA
ELIAERACTFVCACAPPPPASSPSRLPAPESGAAAELQRLSSLTVREHSSGAAEQRSAME
TEGSPSSLPTGTDNSPHDPCKMFIGGLSWQTTQEGLKEYFSKFGEVKESMVMRDPVTKRS
RGFGFVTYADQAGVEQVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE
CKKAQPKEVMTPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTTTYTSRSYSGIAPGYT
YQFPEFHLERTPLMTSSHPAELAAIPLTAYGPMAAAAAAAVVRGSTPSRTAGFLGTSSPG
PMAELYAAANQDSGVSGYISAASPSPGAGFGHGLGKVYPLLYPQGQLIATAFTNGYH
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcttcttctctccagacacgcgactaaagctccggagctccagcgggccgag
ccgcgccgagcggccgggaaacagctccagagagcggcgtggaggaagaggctggcaacg
tgcaaggggcggggggaggggcgggccgaggccgggctccgggaaagcgagggagaggcg
gagcttatcgccgagcgtgcgtgtacgtttgtgtgtgcgtgtgcccccccgccccccgcc
tcctccccctctcggcttcccgcccctgagtctggagcagcagcggagctccagcgcctc
tcctcgctcacagtgcgggaacacagcagcggagcagcggagcagcggagcgccatggag
acggaagggagcccgagcagcctgccgaccggcacggacaactccccccacgacccctgc
aagatgttcatcgggggtctgagctggcagacgacgcaagagggcctgaaggagtacttc
agtaagttcggcgaggtgaaggagagcatggtgatgcgggacccggtcaccaagcggtcc
agggggttcggcttcgtgacgtatgcggaccaggccggtgtggagcaggtcctggctcag
aaccgacacgagctggactccaaaacgatcgaccccaaggtggcgttcccccgccgggct
cagcccaagctcgtgacccggaccaagaagatcttcgtgggcgggctgtcggtcaacacc
accatcgaagacgtgaagcattacttcgaccagtttggaaaggtcgatgatgccatgctg
atgtttgacaaaacaaccaacagacacagaggcttcggctttgtgacctttgagaacgag
gacgtggtggagaaagtgtgtgagatccacttccacgagatcaacaacaagatggtggag
tgcaagaaggcgcagcccaaggaggtgatgacgccgaccggctccgcccgaggccgctcc
agagtgatgccctatgggatggacgccttcatgctgggcatcggcatgctgggctacccg
gggttccagaccacgacctacaccagccgcagttactctgggatcgcacctggctacacg
taccagttcccagagttccatttggagaggacccccctcatgacgtcatcgcaccccgct
gagctggcagccatccccctgactgcgtatggaccaatggcagcagccgctgcagccgca
gtcgttagaggctccaccccttcacgcacagctggtttcctgggcaccagcagccctgga
ccaatggctgaactgtatgctgcagccaaccaggactcaggagtcagcggctacatcagc
gccgctagcccctcccccggcgccgggtttggtcacggtctagggaaagtctaccccctg
ctgtatccgcagggccagctgatcgccaccgccttcaccaacggctaccactga
DBGET
integrated database retrieval system
