Pseudoliparis swirei (Mariana hadal snailfish): 130191405
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Entry
130191405 CDS
T09868
Symbol
taf9
Name
(RefSeq) transcription initiation factor TFIID subunit 9 isoform X1
KO
K14535
transcription initiation factor TFIID subunit 9
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130191405 (taf9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130191405 (taf9)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130191405 (taf9)
Coactivators
SAGA/TFTC/STAGA complex
130191405 (taf9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID-31kDa
CENP-S
Histone
Bromo_TP
CENP-T_C
CBFD_NFYB_HMF
LonB_AAA-LID
TAF10
TIP49_C
TAF
TFIID_20kDa
Motif
Other DBs
NCBI-GeneID:
130191405
NCBI-ProteinID:
XP_056267026
LinkDB
All DBs
Position
Unknown
AA seq
222 aa
AA seq
DB search
MSAPKSIPKDAQVMVQILKDMGITEYEPRVVNQMLEFTYRYVTTIIEDAKIYATHAKKST
VDADDIKLAIQCRMDQSFTSPPPRDFLLEVARQKNVTPLPLIKPYTGPRLPPDRYCLTAP
NYRLKTVQKKVGTPPRLGTTVLVVVVIVVVLFQVTSAAGRISVPRLSIGAVSSRPGTPTL
GTPSVHPVSTKVGPPVSLTGQRFTVQIPPPSQTSTIKTSKSC
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcctaaaagcatcccgaaggacgctcaggtcatggtccagatcctgaaggac
atgggcatcacggagtacgagccccgcgtcgtcaaccagatgctggagttcacgtaccga
tacgtgacgaccatcatcgaggacgccaagatctacgccacgcacgccaagaagtcgacg
gtggacgccgacgacatcaagctggccatccagtgccgcatggaccagtccttcacctcg
ccgccgccgcgagacttcctgctggaggtggcgaggcagaagaacgtcacgccgctgccg
ctcatcaagccgtacacggggccgcgcctcccgcccgaccgctactgcctcacggcgccc
aactaccggctgaagaccgtccagaagaaggtcggcacgccgccgcgcctcggaaccact
gtcctcgtcgttgttgtcattgttgttgttttgttccaggtgacgtcggcggccggcagg
atctcggtgcctcggctcagcatcggcgccgtgtccagccgcccgggcacgcccaccctc
ggaaccccgtctgtccatcccgtctccaccaaggtgggccccccggtgtctctgacgggt
cagaggttcacggttcagatcccacccccctctcagaccagcaccatcaaaaccagtaag
agctgctga
DBGET
integrated database retrieval system
