Pseudoliparis swirei (Mariana hadal snailfish): 130191439
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Entry
130191439 CDS
T09868
Name
(RefSeq) nucleolar transcription factor 1-B-like
KO
K09273
upstream-binding transcription factor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130191439
03021 Transcription machinery [BR:
pswi03021
]
130191439
Transcription factors [BR:
pswi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
130191439
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
130191439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4872
DUF4473
Motif
Other DBs
NCBI-GeneID:
130191439
NCBI-ProteinID:
XP_056267068
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MMNGSSSVSVAQSSRIKNEPDDWTKEDCLTLLERIRSLLPDDDAMKYKTTESHYDWDKVG
FGRFTGDVCRHKWHKVSSEVRKYRTMTELIADAVEFVRNPYKGKKLKTHPDFPKKPLTPY
FRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKVCTLVQDPGWGTPTVGGYSDP
VTPVLCVLVVTGTPCTVCTCSNGYSLYCAELMVNMKDVPSTERMVLCSQRWKLMTQKEKD
MFQKRCEQRRKQYDVDLQRFLESLPDEERDRVMGEEKPGGSRGGMASSPHRAKSLAKLAA
LGREAEPETWSPAGQAKDRRDGKKTPKLPETPKTAEEMWQHSVMGDYLAKHRSDRRKAQA
AVEAAWKSMEKKEKIPWIKKAAEDQKRYEVQYQHVRELLDTRTPPAAQRKPKFDGEPKKP
PVSGYQMFSQELLTNGELNHFSLKERMVEIGKRWHKLTQSQKDKYKKMVEEQQGEYKAEL
EDWVESLSSQERAVYQEFSSSKRRSNTKVGSSPAAKVRVTVKGKAAGPRAAPQPVGVAKR
AMAYRAKQDVSDSTDKSDSSDSDEDDETSGSSDSDDDDDDEDRSSSDESSDSDSD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacggcagcagcagcgtctcagtggctcagagctccaggataaaaaacgaacca
gatgactggacgaaggaggactgcctcaccctcctggagaggatccgctctctgctgccg
gacgacgacgccatgaagtacaaaaccacggagtcgcactacgactgggacaaggtcggc
ttcggccgcttcaccggagacgtctgccgccacaagtggcacaaggtctcctccgaggtg
cgtaagtaccgcaccatgacggagctcatcgcggacgccgtggagttcgtgaggaacccg
tacaaagggaagaagctgaagactcatccagatttccccaaaaagcctctgactccgtac
ttccggttcttcatggagaaacgagccaaatacgccaagatccacccggagatgagcaac
ctggacctcaccaagatcctgtccaagaagtacaaggagctgcccgacaaaaagaaggtc
tgcacgctggtccaggatccaggatgggggaccccgactgttggggggtactccgacccg
gttacgcctgtactgtgtgtacttgtagtaacgggtactccctgtactgtgtgtacttgt
agtaacgggtactccctatactgtgcggagctcatggtgaacatgaaggacgttcccagc
acggagcgcatggtgctgtgcagccagcgctggaagctgatgacccagaaggagaaggac
atgttccagaagcgctgcgagcagaggaggaagcagtacgacgtggacctgcagaggttc
ctggagagtcttccggacgaggagcgcgaccgcgtgatgggcgaggagaaaccgggcggg
tccagagggggcatggcctccagcccgcacagagccaagtctctggcgaagttggcagct
cttggtcgggaggcggaaccagagacgtggtcacctgccggacaagcaaaggacagacgt
gacgggaagaagacgccgaaacttcccgagacgccgaagaccgccgaagagatgtggcag
cacagcgtgatgggagactacctggccaaacacagaagcgaccgcaggaaggcgcaggct
gcggtcgaggcggcctggaagtcgatggagaagaaggagaagattccgtggatcaagaag
gcggcggaggaccagaagcgttacgaggttcagtaccaacatgtgagggagctgctggac
acgaggactccacctgcagcgcagaggaaacccaagtttgatggagaaccaaagaaacct
ccagtgagtgggtatcagatgttctcccaggagttgctgaccaatggcgagctgaaccac
ttcagcctgaaggagcgcatggtggagatcgggaagaggtggcacaaactgacccagagt
cagaaagacaagtacaagaagatggtggaggagcagcagggagagtacaaggcggagctg
gaggactgggtggagtctctgtcgtctcaggaacgagccgtttaccaggagttctcctcc
tcgaaacgtcgcagcaacactaaagtcggcagcagtccggcagctaaagtacgagtgacg
gtgaagggcaaggcggccggtcccagggccgcaccgcagccggtcggggtcgccaagagg
gccatggcgtatcgagccaagcaggacgtgtccgactccaccgacaagagcgactcatcc
gactctgatgaagacgacgagacgtcagggagctcagacagtgacgacgacgatgacgat
gaagatcggagctcctcggatgaatccagtgactcggactcggattag
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integrated database retrieval system
