KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130191502
Entry
130191502         CDS       T09868                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pswi03009]
    130191502 (rrp9)
Ribosome biogenesis [BR:pswi03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    130191502 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_WDR75_2nd Beta-prop_WDR19_1st WDR54 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 130191502
NCBI-ProteinID: XP_056267092
LinkDB
Position
Unknown
AA seq 482 aa
MSAPFFIKKKETPKFANKVKNAAVLKRKIDGDSFIKSKLRAKKANSRRNEEISSDSETES
PVVSRKRQPKEHIDYDETPQEKKLRLAKLYLDQLREEEDDKAEDNSFETDLIAGRLQEEV
LEQKGKLQRLIAKDIMPPEASEIRVLRGHKLPITCLVISSDDKCIYSGAKDCSIIKWDVA
SGKKLHTIHGGRKGTEDRHVGHTAHILCMAISSDGKYLATGDVNKLIMIWEAETCKRLYK
FTGHKGPISGLSFRRGTHELYSASHDRSVKVWNVDENAYVETLFGHQDAITGLDSLSREL
CVTAGGRDRSVRVWKIAEESQLVFHGHDGSIDCIQLINEEHMVTGADDGSVSLWSVNKKR
PLSTVKKAHGCRGDAGLEQPHWIASVAALQNSDTVASGSHDSQVKLWKCGQNYRGLEPLF
TVPVTGFVNSLKFSSSGQFLVAGVGQEHRLGRWWRLKEAKNAIYIIPLKRKLPNPEEARI
HG
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgtctgcgccttttttcattaagaaaaaggaaactcccaaattcgccaacaaggtaaaa
aatgcagcggtgctcaaacgaaagatcgatggggactcgtttattaaaagtaagctacgc
gccaagaaagccaactccagacgcaacgaagagatttccagcgactctgaaacggagagt
cctgtcgtgtccaggaaaagacagcccaaagaacacattgattatgacgaaacgccacag
gagaagaagctcagattggccaaactctacctcgaccagctgagagaagaagaggacgat
aaggcagaagataactcctttgagacagatctgattgctggaagacttcaagaagaagtg
cttgaacaaaaaggaaagcttcagcggcttattgccaaagatatcatgccaccggaggcc
tcagagatcagggtgttaagaggacacaaacttccaattacctgtctggtcattagctct
gatgacaagtgcatctattctggtgccaaagactgctcaatcattaaatgggatgttgcg
agtgggaagaaactgcacacgatacatggtggaagaaaaggtaccgaggatcggcatgtt
ggacacacagcccacatcctgtgtatggccatctcatccgatggaaaatacttggccact
ggagacgtgaacaaactgatcatgatctgggaggccgaaacatgtaaacgtctatataag
ttcacaggacacaaaggccctatatcgggtctttcattcaggaggggaactcatgagctg
tacagcgcctcccatgatcgctcggtaaaagtatggaatgtggacgagaatgcatatgtc
gaaactctctttggccatcaggacgctataacgggactggacagcctgagccgcgagctc
tgtgtgacggcaggaggaagggaccgctcggtgagggtgtggaagatagccgaggaatct
cagctggtgttccacggccacgacggttcaattgattgcatccagctcataaacgaggag
cacatggtaacgggagctgatgacggctctgtgtctctgtggagcgtcaataagaagcgg
cctctcagtacggtgaaaaaggctcatggttgccgtggggatgctgggctggagcagcct
cattggattgcttcagtagccgcgcttcagaactcggataccgtcgcctcaggttcacac
gactctcaggtgaagctgtggaaatgtggccagaattaccgcgggctggagcctctattc
actgtaccagtgactggttttgtcaacagtctgaagttttcgagctctggtcagttcttg
gtggcaggagttggacaggaacacaggttgggaagatggtggagactaaaagaggccaag
aatgcgatctatattatccctctgaaaaggaaacttccaaatccagaggaagccaggata
catggatag

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