Pseudoliparis swirei (Mariana hadal snailfish): 130191517
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Entry
130191517 CDS
T09868
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130191517
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
ROBO family
130191517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
BiPBP_C
C1-set
fn3_4
Motif
Other DBs
NCBI-GeneID:
130191517
NCBI-ProteinID:
XP_056267108
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MSCGALTFVMASVCARLLLPGSRVHAQETPPRIVHHPADVVVKVGNPATLSCRADGSPKP
TIEWLRNGRPLEKGDGQLQPIVLSEGSIFFLSVGGGKRGQSHEGVYTCVARSSAGKATSR
NASLYIAVLQEEFSLQPSDVEVAEGEVAVLNCGPPIGHPEPNVIWKKNGLAIDNTDHHYT
ELSGKLIIAPAEKKHSGAYVCVASNTGGVRESRAARLSVLAKPALVLKPDDVSVRTGESA
QFYCQAKGDPPPAVAWSREQGPLPNGRYLVNPDHTLQIHYVTAQDAGKYTCTAVNDAGVV
TGSAQLLVEEATSTQQRDLHKELSALRVALENVTIVAPGSNISRVQWKLQSLTDQPHYLD
GFEVLYRSLLPASSDWAAKRVALPSFQAPVGPLKRGYKYEFKVRPYGSNLYGRESNTRHL
RVPETVPSAPPMAVSITVSHEQNDTIHLSWGPPPHETHNGLIQGYQVFCVESEEQQYQNW
TVDSGQHNLDISTLKPGRRYWISIAAVNGAGVGMLSDPHGFVINPQIGGAPGSDVQRQDL
SRVLALLQDPVLIGSIAALLWSVLMVAAVFLFRRHNRTSHLIPGRGRAKGLRRLASEDLI
IKHRMAAPDSPWISGGWRPAFNQKYQDLWAHGQKHPGLRGTSLPTSWKDLGRVDSAVPIV
TDSCGVYGTFYMDLMGSGLKTFNSPRCGPKMSHGPPHQQGAETIQIFPQPVGKTPPLGSV
EALPWKQAIRPQPKMGVLRESWDKSHSKQELHAVNSVPIVPTRSQACSSRLYKQRLSHVP
SGRHECDQVAGCPRLLHYSASLHLVDMLPPPPPLPMEDTHSFSSDEGSSRSTGLTGVMSS
LPSVCAVSGRRGQPRAAAHSCSSCSPPSTRSYSSSVDGEQGGTLTAQEAAVYLELSPKPE
RCSSALPEQHPSLPHPFSPSLGYTCGPVQSDGDPAGGEPEYPPIGSRRARLQSTPSSCFS
EWDSQLWNTWSSVTDSNMASARSSLISSVDSCSTNDSAHLHHHAHLARLLAAARAAETAS
GASLSDFSPPASPLSASYPSFRAEGNSLGELEPVPAWDWSSAWVEDMEARCRAHYPGGEY
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcggggctctcaccttcgtgatggcctcagtgtgcgcgcgtctgctcctgcca
ggttccagagttcatgcacaggagacgccgccccgcatcgtccaccacccggccgacgtg
gtggtgaaagtggggaatcccgccacgctctcctgccgggccgatggcagccccaagccg
accatcgagtggctgcgcaacggccggcctctggagaagggagacggacagctgcagccc
atcgtcttatcggaggggagcatcttcttcttgagcgtgggggggggcaagcgtggtcag
tcgcacgagggcgtctacacctgtgtggcccggagcagcgccggcaaggccaccagccgc
aatgcatcactgtacatcgcagtgttgcaggaggagttcagtttgcagcccagtgacgtg
gaggtggcagagggggaggtggcggtcttgaactgtggcccccccattggacaccctgag
cccaatgtcatctggaagaagaatggcctggccatcgacaacaccgatcaccactacact
gagctgagtgggaagctcatcatcgctccggcagagaagaagcactcgggtgcctacgtg
tgcgtggccagcaacaccgggggagtgagggagagcagggcggctcgcctctccgtgctg
gccaagccggcgttggtgctgaagccggacgacgtgtctgtgagaacgggggagtctgcc
cagttctactgccaggctaaaggggaccccccgcctgctgtggcgtggagccgagagcag
gggccactgcccaacggcaggtatcttgtaaacccggaccacactctgcagatccactac
gtgacagcccaggatgctgggaagtacacctgcaccgctgtcaatgatgcaggtgtggtc
accggcagcgctcagctcctagttgaagaggctactagcactcaacagagagacctccac
aaagagctgtcagcactgcgagttgctctggaaaacgtcaccatcgtggcccctgggtcc
aacatatcgcgagtacaatggaagctccagtcccttacggaccagccgcactacctcgac
ggctttgaggtgctctatcgctctctgctgcctgccagctccgactgggcagccaagagg
gtggctctgcccagcttccaggctccagtgggccccctgaagaggggctacaagtacgag
tttaaagtccggccctatggcagcaacctgtacgggagggagagcaacacccggcacctc
agggtccccgagacggtgcccagtgcccctccaatggctgtgtccataacagtgagccac
gagcagaatgacaccatccatttgagctgggggcctccccctcatgaaacccacaacggt
ctcatacagggataccaggtgttttgtgtggagtctgaggaacagcagtaccagaactgg
acagtggacagcggccaacacaacctggacatctccaccctgaaaccagggagacggtat
tggatctccatagcagctgtcaacggggctggagtgggaatgctgagcgaccctcatgga
tttgtcatcaacccacaaataggcggtgcccccgggtcagacgtccaaagacaggatctg
tccagggtcctggccctgcttcaggacccagtgttgatcggaagcatcgccgccctcctg
tggagcgttctgatggtggcggctgtcttcctcttcagacgccacaacaggacaagccac
ctgataccaggacggggccgggccaaaggtttgcgcagactagccagtgaagacctcatc
ataaagcacaggatggcagctccagactccccctggatctctggaggctggagacctgcc
ttcaaccagaagtatcaggacctctgggcccacggtcagaagcatccaggactcaggggc
accagcctcccgacctcctggaaggacctgggccgcgtggactcggccgtccccattgtg
accgacagctgcggcgtttacggcacgttctacatggacctgatgggcagcggcctcaag
accttcaacagtcccaggtgtggccccaagatgtctcacgggccgccccaccagcaggga
gccgagaccatccagatattccctcagcctgtcggcaagaccccgcccctcggcagcgtg
gaggcgctgccgtggaaacaggccataagaccccagcccaagatgggtgtgctgagggag
tcgtgggataaaagccacagcaagcaagagttgcatgccgtgaacagcgtccccatcgtg
ccaaccaggagccaggcgtgttcctccaggctctacaagcagagactcagtcacgtcccg
tcaggccggcacgagtgtgatcaagtggccggctgccctcgcctgctgcattactctgca
tcactacacctagtggacatgctgccccccccaccacctctgcccatggaggacacacac
agtttctcctcagatgaaggctccagtcggtcgacggggctcacgggggtcatgagctct
ctcccgtcggtctgtgccgtgtcgggtcgccgtgggcaaccgcgagccgccgcccacagc
tgctcctcctgcagccccccgtccactcgctcctactcctcgtccgtggacggagaacag
ggcggcacgctgacggcacaggaagccgccgtgtatctggagctgagccccaaacctgag
agatgcagcagcgccttgccggagcagcacccctcgctgcctcaccccttctcccccagc
ctgggctacacctgcggcccggtccagtccgacggcgaccccgctggcggtgagcccgag
tacccgccgatcggctcgcggcgcgcccgcctccagagcacgccctcctcctgcttcagc
gaatgggacagccagctgtggaacacgtggagctccgtcaccgacagcaacatggccagc
gctcgctccagcctcatcagctcggtggacagctgctccaccaacgacagcgctcacctc
caccaccacgctcacctcgcccgcctgctggcggcggcgagggcggcggagaccgcgagc
ggagcctctctgtcagacttctccccgccagcctcccccctcagcgcctcgtacccgtcg
ttccgtgcggagggcaactcgctcggcgagctggagccggttcccgcgtgggactggagc
tcggcctgggtggaggacatggaggctcggtgcagagcccactatcctggcggggaatac
tga
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