Pseudoliparis swirei (Mariana hadal snailfish): 130191542
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Entry
130191542 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: V(D)J recombination-activating protein 1-like
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
130191542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130191542
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130191542
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130191542
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1_ZnC2
RAG1
RAG1_DNA-bd
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_10
zf-C3HC4_3
zf-RING_2
U-box
TRAF3_RING
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
130191542
NCBI-ProteinID:
XP_056267144
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MVEESLETDGPRSSLPAKLRHPHSQYSQWKFKLFRLGSMEKAPVACETQHEKGASLGNPP
PADLNKELDNGIDPGSVMKLCLGGKSKENVEGPGQRVDVKQQEMDTHMNQLRCLCRLCGM
TLRKVKGPVRDVNGDLDEISKGSLRKMGCKFTSWPGIVLKVFKVDVTKDTESVHPLSFCQ
RCWVVAIRGGGVCSFSKTIVPEWKPHSSTCHLCSPRKPSFQRDSGRKRRKDIPRAQSLAK
RTQRDHGNNIAIGEKRALRPFGDYHHGPVQSAWRKHSIQRGQWVTNITHCQKDHLDTQLI
SENLPIDFIFSFTCLVCDHLLSDPVQSPCGHLFCRSCILKYNHALGPHCPACNLSCAIDD
LAPPAKAFLSALYSLSLLCPRSGCGKQVRIDAFKAHCLGHELDEQDDKQQSSELDNYLLT
NKGGRPRQHLLSLTRRAQKHRLRDMKNQLKAFADKEEGGDLKSVCQTLFLLALRSGKEHR
QADELEATMQGRGFSLQPAVCLAIRINTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRAA
EKELLPGFHQFEWQPALKNVSTSCSVGIINGLSGWASSVDDFPVDTITRRFRYDVALVSA
LKDLEEDILEGLRESGMEDRACTSCFSVKIKESCDGMGDVNEKHGGGPAVPEKVVRFSFT
VMSVSVLADDEEEEDVTIFTEPKPNSELSCKPLCLMFVDESDHETLTAVLGPVVAERNAM
KESNLILSMGGLPRSFRFQFRGTGYDEKMVREVEGMEASGSTYVCTLCDSTRAQASENMV
QHSITRSHEENLDRYEIWRTNPFSESVDELRDRVKGISAKPFMETQPTMDALHCDIGNAT
EFYKIFQDEIGEVYQKFKPSRVERRSWRAALDKQLRKKMKLKPVMRMNGNYARRLMTQEA
VEVICELVPSEERREALRELMRIYIQMKPVWRATCPAKECPEQLCRYNFNSQRFADLLSS
AFKYRYNGKITNYLHKTLAHVPEIIERDGSIGAWASEGNESANKLFRRFRKMNARQSKTF
ELEDVLKHHWLYTSQYLQKFMEAHKDSAKSLXATINQVESQDFM
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggagagcctggagacagacggccccagatcctctctgccggctaagctccgc
catccccactctcagtactctcagtggaagtttaaactgtttaggctggggtccatggag
aaggcccctgtggcctgtgagacacagcatgagaaaggagcctcgttagggaaccctcct
cctgcagatctaaacaaagagttagataatggcatcgatccagggagtgttatgaaattg
tgcctggggggaaaaagcaaggaaaatgtagagggccctggccagagagttgatgtgaag
caacaggaaatggacacccacatgaatcaactgaggtgcttgtgccgtctctgtggaatg
accctgagaaaagtcaaaggaccggtgcgcgatgtgaatggagatctggatgagatcagc
aaaggttctctccgtaaaatgggatgcaagtttacaagctggcccggtattgtcctcaaa
gtctttaaagtggacgtcacaaaggacacagaatctgtccaccctctttccttctgccaa
cgctgctgggtggtagccataagaggagggggcgtctgcagcttctccaaaacaatagtc
ccagagtggaaaccccactcctccacctgccacctttgctcccccaggaaaccttcattc
cagcgggattctgggagaaagaggcggaaagacattcccagagcgcagagtctggcaaaa
aggacccagagggaccatggcaacaacattgccattggtgagaagagggctctgagacca
tttggagactatcatcatggtcctgtgcaaagtgcctggaggaaacacagcatccagaga
gggcagtgggtgacgaacatcacccactgccagaaagaccacctggatacccagctgatc
tctgagaatctccctatagacttcatcttttctttcacctgcctggtatgcgaccacctg
ctctctgacccagtccagtcgccctgtggacacctcttctgccgcagctgtattctaaaa
tataaccacgctctgggacctcactgcccggcctgcaacttgtcctgcgccattgatgac
ctcgcgccgcctgccaaagccttcttatcagccctgtattccctgtctttgctctgtccc
aggagcggctgtggcaagcaggtcagaatagacgcatttaaagctcactgtctgggccat
gagctggacgaacaggacgataagcagcagtcatcagaacttgacaactacctgttaacc
aataaaggggggagacctcgtcagcacctgctatcactgacccgccgtgcccagaagcat
cggctgagggatatgaagaaccagctgaaggcgtttgcagacaaagaggaaggcggcgac
ctgaagtctgtgtgtcagactctgtttctgcttgcactgaggtctgggaaagaacatcgc
caggcagatgagctagaggctacgatgcaaggcagaggctttagtttgcaacctgctgtg
tgcttagccattcggatcaacactttcctgagctgcagccagtatcacaagatgtaccga
actgtcaaagccaccagcggccgccagatctttcagcccctccacaccttgcgggctgca
gaaaaagagcttctccctggctttcaccagtttgaatggcagccagctctcaagaatgtg
tctacatcttgcagtgttggcattattaatgggctctctggatgggcttcctctgtggat
gatttcccagttgacaccatcaccagacggttccgctacgatgtggctctggtgtcagcg
ttgaaggatctggaggaggatatcttggaggggctgagagagagtgggatggaagaccgt
gcttgcacctcatgcttcagtgtcaagatcaaggaatcctgtgatggcatgggcgatgtc
aacgagaagcacggtggaggaccagctgttcctgagaaggttgtgcgtttttctttcact
gttatgtcggtctctgtcctggcagacgatgaggaggaggaagacgttaccatcttcact
gagccaaagccaaactcagaactgtcctgtaagcccctgtgcctgatgtttgtggatgag
tcagaccatgagacactcacagctgtcctggggcctgtagttgcagagcgtaatgcaatg
aaagagagcaacctcatcctgtccatgggcggacttcctcgttccttccgctttcaattc
agaggcacaggatatgatgagaagatggtgcgcgaggtcgagggcatggaggcctcaggg
tccacctacgtctgcactctttgtgactccactcgggcacaggcctctgaaaacatggtg
caacactccatcactcgcagtcatgaagagaacctcgatcgttacgaaatatggagaacc
aaccccttttctgagtctgtagatgagctgcgcgacagggttaaagggatctctgccaag
cccttcatggagacccagccaacgatggatgcattacattgtgacatcggcaatgccact
gagttctacaaaatcttccaggacgagatcggagaggtgtaccaaaagttcaaacccagc
cgggtggaacggcgcagctggagggcagccctggataaacagcttaggaagaaaatgaag
cttaaaccagtgatgaggatgaatgggaactatgcccgcaggcttatgacccaagaggct
gtggaggtgatctgtgagctagtgccctcagaggagaggagggaggctctgagggagctg
atgaggatctacatccagatgaagccggtgtggcgcgccacctgccctgctaaggagtgt
cccgagcagctgtgccgctacaacttcaactcccagcgctttgccgaccttctctcctcc
gccttcaaatacaggtacaatggaaagataaccaattacctgcacaagaccctggcccat
gtgcctgaaatcatagagagagatggatccatcggagcctgggccagcgaagggaacgag
tctgcaaacaagctcttcaggcgtttccggaagatgaatgcacgtcagtcgaagaccttt
gagcttgaggacgtgttgaaacatcactggctctacacctcccagtacttgcagaagttt
atggaagctcataaggactctgccaaatcactgtaagccaccattaaccaagtagagagc
caggactttatgtga
DBGET
integrated database retrieval system
