Pseudoliparis swirei (Mariana hadal snailfish): 130191544
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Entry
130191544 CDS
T09868
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03018
RNA degradation
pswi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130191544 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
130191544 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130191544 (lsm7)
03041 Spliceosome [BR:
pswi03041
]
130191544 (lsm7)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130191544 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
130191544 (lsm7)
Spliceosome [BR:
pswi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
130191544 (lsm7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
130191544
NCBI-ProteinID:
XP_056267148
LinkDB
All DBs
Position
Unknown
AA seq
92 aa
AA seq
DB search
MADKEKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRGKLN
WLQTLLQVGKKCIKNTEQHTVELLLGHMTRQN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagagaagaagaaaaaggagagcatcttcgacttgtcgaaatacatcgac
aagcccattcgtgtgaagtttcaaggaggacgagaggccagcggggtcctgaaagggttt
gatcctctgctgaacctggtgttggacggcacaatcgagtacatgcgtggtaagttaaat
tggctacaaactctcctgcaggtcggaaagaaatgtataaaaaacactgaacagcacact
gtagaacttcttcttgggcacatgacacggcaaaactaa
DBGET
integrated database retrieval system
