Pseudoliparis swirei (Mariana hadal snailfish): 130191769
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Entry
130191769 CDS
T09868
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130191769
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130191769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
DUF3431
Motif
Other DBs
NCBI-GeneID:
130191769
NCBI-ProteinID:
XP_056267434
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All DBs
Position
3:complement(9289084..9295067)
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AA seq
1006 aa
AA seq
DB search
METLTPEQWREIMNKKMHFPPELIGAIQEGKIEMMSRLLKTGDGILRQLDESEDRQWREA
LNLSIRLGNEMCVDALLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
HSFSQAIFDHSIDNSQFAPGVTPLTLACQKDLYDIVAMLTQKGHVIPWPHKISCSCLECH
NGRQYDLLKFSLSRINTYRGIASRAYLSVTSEDAMLGAFTLSKELRKLSKKEPEFKPQYL
GLEELCQEFAVELLGMCRNQSEVTTILNSCGDESQDSLEEQAFEEGIPNLSRLRLAVNFN
QKQFVAHPICQQVLSSIWCGNLSGWRGSKTTWKLFVSVGIFFTMPFLCLVYWIAPKSKLG
KILKTPVIKFLLHSASYLWFLITLLGESITMEIYRDKFASRTQDILHSSFHMVWVVGFFW
YECKEVWMEGLRSYFLDWWNCLDVMVLSMYLASFALRVLIVLKGYFLCHDYDSIADCIYF
TQTERHQWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPHLGKFNETFHFLFWTMFGVANQEYVDMTQYMLAEF
VGRVLYGIFTLVIVIVLLNMLIAMITNTFQKIEDDADVEWKFARSKLYLNYFREGLTIPV
PFNIIPSPKAVFYILKAIFRKICCCCTSKSEDRYPALASMADGKGSEDTPLPYRQQVIRA
LVQRYIEAARREFEETKRKDIGNRITLLTKVVTRMHSDMKVVHQVLIDGHAASDPSAKDA
ASLLGKYIAGAKNNFVGFKSRPDEINAALKVTVHHGEEGVDKEKLDSDTKQESEAQQSEV
GECSAGGSKPVTDCDFLKMEEGRAQIEPGDGKETEKKEQVEADNNEVKEGVVAGTSFNHG
GENQKAEAPQGEAEKRREGETRTVGKVREKQTETTSQQAEMEAKCMKGRTCERDGAEKSG
FKNSDAEPGAKVTVPSPTDSSSSKDTGFGSQEGEGLIDGALVRPSP
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggagacgctcacgcctgaacaatggcgcgagatcatgaacaagaagatgcacttccct
ccggagctcatcggtgccattcaggaggggaaaatcgagatgatgtccagactgttgaag
accggcgacggcatcctccgccagctggatgagtccgaggatcgccagtggagggaggcc
ctgaacctgtccatccgcctgggcaacgagatgtgcgtggacgccctcctgcaaggggtc
aagttcgacttccggcagattcacgaggccctgctggtcgctgtagacaccaaccagccc
agagtggtgaagcgcctgctggaccgcctggaccaggagaaaggcaacaagatggacgtg
cactccttctctcaggccatctttgaccactcgattgacaactcccagtttgcacccggt
gtgactcctctgacgttagcctgccagaaagacctgtatgatatcgtggccatgctcacc
caaaaaggtcacgtcatcccgtggccacataagatatcctgttcctgcctggagtgtcat
aacggccgacagtacgaccttctgaagttctccctgtctcgtatcaacacctaccgtggc
atcgccagccgcgcctacctgtctgtcacctctgaggatgccatgctcggagctttcact
ctcagcaaagagctccgtaagctctccaaaaaagagccggagttcaagcctcagtatctg
ggcctggaggagctctgtcaggagtttgccgtggagttgctgggcatgtgtcgcaaccag
agcgaggtgaccaccatcctgaacagctgtggagacgagagccaggactccttagaggag
caggccttcgaggaggggatccccaacctgtcacgtctgcggcttgctgtcaacttcaac
cagaagcagtttgtggcccacccaatctgccagcaggtgctgtcatctatctggtgcggg
aacctgtcaggctggagaggcagcaagacgacctggaagctgtttgtctccgtggggatc
ttcttcaccatgcccttcctctgcctcgtctactggatcgcaccaaagtcaaagctgggg
aagatactcaagactcctgtgatcaagttcctcctccactctgcctcctatctgtggttt
ctcatcacgttactgggagaatcgataacgatggagatatatcgagacaaatttgcttcc
cgcacgcaggacatcctgcacagctccttccacatggtgtgggtggtcggattcttctgg
tacgagtgtaaggaggtgtggatggaggggttgcggagctacttcctggactggtggaac
tgcttggatgtgatggtgctcagcatgtacctggcgtccttcgcgttacgtgtgctcata
gtgctcaaaggctacttcctctgccacgattatgacagcatagcggactgcatctacttc
actcagactgagcgccatcagtggcatcaggaggacccccagctgattgcggaggtgctg
tttgcagtgacgagcatgttgagcttcacgcggctggcgtacatcctgccggcacacgag
tctctgggtactctgcagatctccatcgggaagatgattgatgacatgatgagatttatg
tttatattgatgatcatcggaacagccttcctctgtggcatcaacaatgtctatgttcct
tatgtcatctctccacatcttggcaagtttaatgagacgttccacttcttattctggact
atgtttggcgtggccaaccaggaatacgtggatatgacgcagtatatgttggcagagttt
gtcgggagggttctgtacggcatcttcacactcgtcatcgtcatcgtcctgctcaacatg
cttattgccatgatcaccaacacctttcagaaaattgaggacgatgcagatgtcgagtgg
aaatttgcccgatcgaagctgtacctcaattacttcagagagggcctcaccattcctgta
cccttcaacatcatcccctcacccaaagctgttttttacatcttaaaggccatctttaga
aaaatctgctgctgctgcacttctaaatctgaggacagatatcccgctctagcctcgatg
gccgacgggaagggatctgaagacaccccgctgccttaccgccagcaggtgatcagagct
ctggtgcagcgctacattgaagcggcgcgcagggagttcgaggagaccaagaggaaagat
atcggtaatcggatcactttgctgaccaaggtggtcaccaggatgcacagtgatatgaaa
gtggtccaccaggttctgatcgatggacacgctgcaagcgacccatcggccaaggatgcc
gcctcccttctggggaaatacatcgctggagccaagaacaatttcgtaggttttaaaagc
agaccagatgagataaatgcagcacttaaagtgacagtgcaccatggagaagaaggtgtt
gataaagaaaagcttgactcggatacaaaacaagagtcagaggcacaacagagtgaggtg
ggcgaatgtagcgcagggggatcaaagccggtaacagactgtgatttcctgaaaatggag
gaaggcagagctcaaatagagccaggagatgggaaggaaactgagaaaaaagagcaggtg
gaagccgacaacaatgaagtgaaagagggagtcgtggcaggaacaagttttaatcacgga
ggagaaaatcaaaaagcagaggccccacagggtgaggcagaaaaaagaagagagggggag
acacgcacagtggggaaggtgcgtgaaaaacaaacggagacgacctcccagcaagctgag
atggaggcaaaatgcatgaaaggtagaacatgtgagcgggatggagctgagaagtctggt
tttaagaacagcgatgcagagcctggagccaaggtcacggttccctcgccaacagacagc
agcagctccaaggacaccggcttcggttcccaggaaggggaggggttgatcgacggggcc
ttagtgagaccgtcgccttag
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