Pseudoliparis swirei (Mariana hadal snailfish): 130191779
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Entry
130191779 CDS
T09868
Name
(RefSeq) vacuolar protein sorting-associated protein 26B-like
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130191779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130191779
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
130191779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps26
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
130191779
NCBI-ProteinID:
XP_056267444
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All DBs
Position
3:15582378..15590165
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AA seq
333 aa
AA seq
DB search
MSFFGFGQSADIDVVLNDAETRKKAEHKSEDGRKDKYFLFYDGETVSGKVNVTLKYPGKR
LEHNGVKIEFVGQIELYYDRGNHHEFVSLVKDLARPGELTQSQTFDFEFTHVEKPYESYT
GQNVKLRYFLRATVSRRLNDISKELDIVVHTLSSYPELNSSIKMEVGIEDCLHIEFEYNK
SKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVR
GESIPIRLFLAGYEMTPTMRDINKKFSVRYYLNLVLIDEEERRYFKQQEITLWRKGDIVR
KSMSHQAIIASQRFEGSSNPGKPQTQSNEEEDS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctttggctttggtcagagtgcggacatcgatgtagttctgaatgacgccgaa
acgagaaagaaagcggagcataaaagcgaagacggcaggaaggacaagtattttctcttc
tacgacggggagacggtgtcggggaaagtcaacgtgacgctcaagtacccggggaagagg
ctcgagcacaacggcgtcaagatcgagttcgtcggccagatagagctgtactacgacaga
gggaaccaccacgagtttgtctccctggtgaaggacttggctcggccaggtgagctcaca
cagtcccagacgtttgactttgagttcacgcacgtggagaaaccctacgagtcttacacc
ggccagaacgtcaaactacgctactttctgagggcgacagtcagccggagactgaacgac
atcagcaaagagctggacatcgtggtgcacacactcagcagctaccccgagctcaactcc
tccatcaagatggaagtggggatcgaggactgtctgcacatcgagtttgagtacaataaa
tccaagtatcacctcaaagatgtgatcgtggggaagatttacttcctgctggtgaggatc
aaaatcaaacacatggagatagacatcatcaagcgggagacgaccggcacggggccgaac
gtctaccacgagaacgacaccatagcgaagtatgagatcatggacggtgcgccggtcaga
ggagagtccatccccatcaggctgttcctcgcgggctatgagatgacacccaccatgagg
gacatcaacaagaagttctctgtgcggtactacctcaacctggtcctcatcgacgaggag
gagaggcgctatttcaaacagcaggagatcacgttgtggaggaaaggcgacattgtgagg
aagagtatgtctcaccaggccatcatcgcctcgcagcgcttcgaaggctcctccaatccg
ggaaagccccagacccagagtaatgaagaggaagacagctaa
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