Pseudoliparis swirei (Mariana hadal snailfish): 130191851
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Entry
130191851 CDS
T09868
Name
(RefSeq) LIM domain kinase 1-like isoform X1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130191851
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pswi01001
]
130191851
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130191851
Protein kinases [BR:
pswi01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
130191851
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
Kdo
ABC1
Haspin_kinase
RIO1
PDZ
Motif
Other DBs
NCBI-GeneID:
130191851
NCBI-ProteinID:
XP_056267550
LinkDB
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Position
3:7235770..7250487
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AA seq
770 aa
AA seq
DB search
MSRLDQRLRRGMKGRCCECGCILSHWYYEREGQLYCKKHYWARYGEHCHGCRETITTGLI
MVAGEQTYHPECFTCVSCEVLIGDGDTYTLVERTKLYCGHCFSQGAVSSVGSASLLTKSS
HMVALVSLPPHAGARRALTVTTDLSQEKGPLVTLTGLDTAALSPDLLSSVHNGDRVLEVI
GIPVHNIPPDKINGVIQDTSRPLQLTIEHNPQSPDDLLRSNNPQNDISCHDPCAREKLSS
AHKLPSLEEEPSPGDEPDEPISLSLSPPQHQENMGMRSRHILRSCSIDKCPRSAGARSPL
SQRRDMVRSESLRVDAGGRTHRIFRPSDLIHGEVLGKGFFGQAVKVTHQETGEVMVMKEL
IRFDEETQKTFLKEVKVMRCMEHPNVLKFIGLFYKDKRINFVSEYIQGGTLRETIIKMDE
DFPWSTRVGYAKDIAAGMAYLHSMNVIHRDLNSHNCLVRENQSVVVADFGLARLVKKERN
QPGTSSVERPGKGTPSELRRPDRRKRYTVVGSPYWMAPEMIHGKSYDERVDVFSFGIMIC
EIIGRVNADPDYLPRSNDFGLNVAGFLQQFHPPQCPPAFLPLAVLCCDMDADKRPSFSKL
EEWLDNLLMHLDIGLPLLSELEQHRRAFWLKNSLHNHSRNQDRTLDSHEQTPRSPPQRQS
SDLMQHPDNAIPQIESNHLAQSPNQNTTPDSHSDGERHARGVTCSRSTSRDQGENGSETS
VCKNPSGQPRAEDEPLPPLQVNHSLVGRSNRQRRTCRVLWDRSTEDSSFL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgactggaccaacgtcttcgaagaggaatgaaaggacgttgttgtgaatgtggc
tgcatcctgtctcactggtactatgaaagagagggacagctgtattgtaagaagcactac
tgggcccgctatggagagcactgccacggctgcagagagaccatcaccacaggactgatt
atggttgctggagagcagacgtaccacccggaatgcttcacctgtgtgagctgtgaagtg
ctcattggagatggagacacctacacgctcgtcgagcgcacaaagctctactgtggccat
tgtttcagtcagggtgccgtgtcatctgtggggtcagcttctcttctcaccaagagttcc
cacatggtggcgctggtgtctctccctccccatgcaggtgcccgacgggccttgactgtc
accactgacctcagccaagagaaaggccctcttgtcactctgaccgggttggacacagct
gccctcagccctgacctgctgtcctctgtccacaatggtgaccgagtactagaggtcatc
ggcatccctgtccacaacattcctccagacaagataaacggtgtgatccaggacacaagc
cggccactgcagctgaccattgaacacaacccgcagtcgcccgatgacctccttcgctca
aacaaccctcagaacgacatcagctgtcatgacccctgtgcccgggagaaactttcttca
gcccacaaactcccaagcctggaggaagagccgagtccaggggatgagccggatgaacca
atcagcttgagcctctcccctcctcagcaccaagaaaacatgggaatgcgatcccgacat
attctacgcagctgtagtatcgacaagtgtcctcggtccgctggggcgcggtcgccttta
tctcagaggagggacatggttcgctcagagtctcttcgcgtggatgccggagggcggacc
catcgcatcttcagaccgtcggacctcatccacggagaagtgctcggcaaaggcttcttt
ggacaggcggtcaaggtaacgcatcaggagaccggggaggtgatggtgatgaaagagttg
atacgttttgacgaagagacccagaagactttcttaaaggaggtgaaggtgatgcgctgt
atggagcatcccaatgtcctcaagttcattggactgttttataaagacaaacggatcaac
tttgtctctgaatacattcagggaggaactctccgagagaccatcatcaaaatggatgag
gatttcccctggagtacaagagtgggttatgccaaagacattgcagctgggatggcctat
ctacactccatgaatgttatccatcgagatctgaattcacacaactgcctggtcagagag
aaccagtctgtcgtggtggcagattttggactcgccaggctggtaaaaaaggagaggaat
cagcccgggacatcctcagtggaacggccggggaaggggacgccgtcagagctccgcagg
ccggaccggaggaagcgctacaccgtggtaggaagcccctactggatggccccggagatg
atccacgggaaaagctacgacgaacgggtagacgtcttttcctttgggatcatgatatgt
gagattataggtcgagtgaacgctgaccctgactaccttccccggtccaatgactttggg
ctgaatgtcgccggtttcctgcagcagttccacccccctcagtgccccccggccttcctg
cccctggctgtcctctgctgcgacatggacgctgataaacgtccttccttttcgaagctg
gaggagtggcttgataacctgctgatgcatctggacatcggcctgcctctgctctctgag
ttagagcagcaccgcagagccttctggctgaaaaacagccttcataaccactctcgcaac
caggacaggaccctggattctcacgaacaaaccccccgctcgccgccacagagacagagc
tcagacctcatgcaacatccggacaatgcgataccccaaatagagtctaatcacctcgct
cagagcccaaaccaaaataccacacctgacagccattcggacggggagcgacacgcacgg
ggagtgacgtgttccaggtcgacgagcagagaccaaggggagaatgggtctgaaacctcc
gtatgcaagaacccctcaggacaaccgagggccgaggacgagcccttaccaccgctacag
gtcaaccactcgctggtgggccgttccaacaggcaacgaaggacatgcagagtgctgtgg
gacagatccacagaggacagctcttttctttga
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