Pseudoliparis swirei (Mariana hadal snailfish): 130191868
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Entry
130191868 CDS
T09868
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130191868
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
130191868
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
THSD1_N
THSD1_D3
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CFP_C
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
130191868
NCBI-ProteinID:
XP_056267565
LinkDB
All DBs
Position
3:4706589..4718426
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AA seq
929 aa
AA seq
DB search
MPQAVSLLPFLLALLGCAFAGLNIWPSFHVALSNASVFVDFSTKSDSGTIRNTSLSLVDT
GTNTTLLTRNIPDIQSAGRVEFDCSCFLYAGTFRFLLRQTSVTAASNGTQEGSAPSTDRW
WSSELQVQWPTFHIAVERAGNHSGSFQVGISTNEHFQACSRGIDAALFLEVSYIEFNQIG
RIRIDKVQARTRHPIRPLRSQSVELPCVFPFTERDFIRVALRSPHAAQDVKSSGPLYLSR
IFSYKLLVENTSAYRGGCEGTMTVKLIAPPCAHVNGKVLLYKDGGGAGTPGRGVAVSPGM
EAGETAPMGLEPSSPPLAFNWLTGGESETEFNCSVFFIGRNKYCFRFVLNLSRSPSPAQT
CLVVHRSAESWGSWLPWSVCSVSCGEGARERVRECLLPSGVGGMQCTGMVKEQSLCSLEA
CVVLPAPSPSLAPGAVGVARLGGNMVVVAGISLCLAVILATVLVTLWRKLCKTPQCSSVR
GGSMHSPGGRKLSDEASIFGHSLQRPSLSDGHGQPGVVAVGAAQEDRPSLGTQPLSQTPV
IPLSQTPDRLSPSGPKMLPPIFGYHLAQQQLKDMKKKGLKEATQMYHVSSSPVHDTVSGT
SASPTNSLIPTPSGFAPPSLREDANYDHFQIATPFSELPSQTSRLTADRPSPGAELVLGP
SARASGGGSKWRDRTADWVEMVERSGFAGLRGGGGGEAGMGNSFNTNPHFRRTSSFNDTT
PQPRSSGHCRPFRERSLTQVGSRTLPEGSCWNKGGREPCGSYPIPEHGALEWAKSRPQMN
DQRKPRIEAAAPSYSAQLKTNSISASAIHADAEVGGATDGRRSGEAGGGGGNSGIGGGPA
SLSVDRAEQNWNRRGPSPIQRNILARKLKEAQSYSGGVKGRQRSSTFSASASEQRKGRCH
SLPYGGGGGPPYMLSEAEQRMLDLDMSEV
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggctgtctccctgctgccctttctgctggcgctcctgggatgtgcttttgca
gggctcaatatctggccctccttccacgttgcccttagcaacgccagtgtatttgtggac
ttcagcacaaaatccgacagcggcaccatccgcaacacgagcctctctctggtcgacacg
ggaaccaacaccacccttctgaccaggaacatccccgacatccaatcggccggcagggtg
gagttcgactgctcctgcttcctgtacgcaggaactttccgcttcctgctgaggcagacc
agcgtgactgccgcttccaatggcacccaggagggcagcgcaccgagcaccgaccggtgg
tggagctcagaactgcaggtgcagtggcccacctttcacatcgctgtggaaagggccgga
aaccactcgggatcatttcaggttgggatctccaccaatgagcacttccaggcgtgctcc
aggggcatcgacgcggctctcttcttggaggtcagctacatcgagttcaaccagatcggg
cgaatccgcatcgacaaggtccaggcccgcacgcgacacccaatcagacccctccgttcc
cagagcgtcgagctgccctgcgtcttccccttcacggagagagacttcatacgagtggcc
ctgcgctctccccacgccgcgcaggatgtgaagagctccgggccgctgtacctgtcccgc
atcttctcctacaagctgctggtggagaacaccagcgcctacaggggcggttgcgaaggg
acgatgaccgttaaactgatagctccgccttgtgctcacgtcaatgggaaagtgttgctg
tataaggatggaggtggtgctgggactcctgggagaggggttgcggtttcccccgggatg
gaagcaggtgaaacggcaccgatggggttggagccctcgtcgcccccgttggccttcaac
tggctgaccgggggggagagcgagacggagttcaactgttctgtgttcttcatcgggagg
aacaagtactgctttcgctttgtcctcaacctcagtcgctccccgagtcccgcgcagacc
tgcctggtggtccacagaagcgcagagtcatggggctcgtggctgccctggagtgtgtgc
agcgtgagctgcggagagggggcgagggaacgagtacgtgagtgtctgctgccctccggc
gtcggggggatgcagtgcaccggcatggtgaaggaacagtccctctgctcgctggaggcc
tgtgtcgtgttgcccgctccttctccatccctcgcccccggggccgtcggagttgcccgc
ctgggaggcaacatggtcgtggtggctggcatctccctctgcctggcggtgatcctggcg
acggttctggtgacgttgtggagaaagctttgcaagacccctcagtgcagctccgtacgc
ggaggctccatgcattcccccggagggcgcaagctctccgatgaggcgtccatctttggc
cacagcctccaaaggcccagcctgtccgacggtcacggccaaccgggggtcgtcgctgtg
ggtgcagcccaggaagacaggccttccctgggcactcagcctctctcacagacccccgtg
attcctctctcacagactccagacaggctgtccccctcagggccgaagatgctgccacca
atatttgggtaccatttggctcagcagcagttgaaagacatgaagaagaaagggttaaag
gaggcaacgcagatgtaccacgtctcttcaagcccggtccacgacacggtgtcggggaca
tctgcttcacccacaaactccctcattcctacgccgagtggattcgctcctccctcgctc
cgggaggacgcgaactacgaccacttccagattgcgactcccttttccgagctgccgtcg
cagacttccaggctcacggcggaccgaccgagtcccggagcggagctcgtcttgggtcct
tcggcccgtgcaagcgggggcggctccaaatggcgtgaccgcactgctgactgggtggag
atggtagagaggagtgggtttgcaggtctcagaggaggaggaggaggagaggcagggatg
ggaaactcctttaatacaaatccacatttccgccggacctccagctttaatgacaccaca
ccccaacctcgatcctctggacactgcagaccgtttagagaaaggagtctgacccaggtt
ggatcgcgcacccttcccgaaggaagttgctggaacaaaggaggccgggagccgtgcggc
tcgtaccccatcccagagcacggggccctcgagtgggcgaaatccagaccccagatgaat
gaccagaggaagccccggatagaggccgccgctccctcctacagcgcccaactcaaaaca
aacagcatttcggcgtctgcgatacacgcggatgccgaagtcggcggcgcgacggatggg
cgaaggagcggggaggcgggaggcggagggggaaactcggggatcgggggggggcccgcc
agcctgagcgtggatcgggccgagcagaactggaaccgccgcggcccgtcgccgatccag
aggaacatcctggcccggaaattgaaggaggctcagtcgtactccgggggggtcaagggt
cgccagcgcagctccaccttcagcgcgtcggcctcggagcagaggaaaggtcgctgccac
tcgctgccctacggcggcggcggcggccccccctacatgctgagcgaggcagagcagagg
atgttggacctcgatatgtccgaggtgtag
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