Pseudoliparis swirei (Mariana hadal snailfish): 130191890
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Entry
130191890 CDS
T09868
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130191890 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130191890 (nfrkb)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
130191890 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
130191890
NCBI-ProteinID:
XP_056267602
LinkDB
All DBs
Position
3:2882091..2897632
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AA seq
1251 aa
AA seq
DB search
MDALTHMLADPLEPKEEHDEQITEECMLGNCRLNLPEDLLEDPDIFFSVMSASTWSEVLS
DSQRQHLRQLLPQFPDNNVAEQDSTISDIFHNRNFNFGNPLHLAQKQFRDGYFNPEVVKY
RQLCAKSQKKRQLYSLQQYYHRLLKHILVSRKELLDFAVHSGLDFPPKKKLMTKTHAEMR
EPRVRRRLSRILKEVKTECGDSDASSDDDDISLWAPAPQSPSSPTPAVSLRVLPSLSTQD
MKTTEGIELGEQDLKAMLNNHREKRKRQPDHPDLMTSDIHLGDILSRANIGRKGAVAFFD
LSLPKKKIKEERRKKKMRTIKVEAEDPCEILAPSDTPSAPTPSVANSLPDTPSTPLANIK
EEVVEECPSSPVPVEEIAISFFSLLESILRTEHFTSTSLLEEKVQMWQCSPASSLNVWFS
SVPCWSDLVLQALQFLAGETKDGMMALPSGFSPFVEFADESQQWRWIGPTQDTEKDLSAL
CQLWLDSKDLVIKLENEDMLEMTSPTPRVSTDYVVRPSTGDERQVFQIQEQQRYNQPHKA
FTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGEG
TRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRSRS
QEEFERIHQAQAAAAKARKALQQKPKPASKPKSGSKEGGGKTPGSLEAGQDAVSIPMSPT
SSTPTLNTPGTPKSPLTCPATTPTKTGVPEAIKTSTGVLLVSPPSLPQLGSILPSGQAGP
PVASHHAARLVSHLAAGSLPQVRVVSAPPGLGSPLGGQQATLLHQAPHQIRMPVSMATKG
ISQAMVSVPLRSASSPVQAPTTISVSAVALGKPLARSPGSPAHNPGSPARLQVVGNPNIK
QVSITATNLRIQGKDVLRLPPSSITTDSKGQTVLRITPDMMATLAKSPVATVKLTPDFLG
GGGKSISATLRVAPPHSSASSVSCATSCIGDVQTTKAGAVSSGLMKAAGDAAIRLMPTLA
VTMADQKSRSFPGVSSPDKSGTTIRIMPGLGVIPQKQGQTITMTTTTGSKTLTTCANVVT
MAASVVTGAKGLTVAPGVSCSTLTLGTTTATVRQVPATVVTTQPGKLPARITVPLSLLTQ
PLKNKSVVTTPMVKGSLNTNISSLGRNIILTTMPAGTKLIAGNKPVSFVTAQQFQQLQQQ
GQATQVRIQTVQAQQLQQHMASGSQKSVSTVVVTTAPSPKCAPDPPTGPQQ
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctcacccacatgctggcagaccctcttgaaccaaaagaagaacacgatgaa
caaatcacagaggaatgcatgctggggaactgtagattaaaccttccagaggacctactt
gaggaccctgacattttcttctctgtgatgagtgcgagcacctggagtgaagtgctgtcg
gattctcagagacagcacctccgtcagctgttgccacagtttcctgacaacaatgtcgca
gagcaggacagcaccatcagtgacatcttccacaacagaaactttaacttcgggaatccc
cttcatcttgcacaaaaacaattcagagatggttacttcaaccctgaggtggtcaagtac
agacaattgtgtgcaaagtcccagaagaagagacagttgtactccctccagcagtattac
cacagactgttgaagcacatcctcgtctccagaaaggagctgctagattttgcggttcac
agtggactggactttcccccgaaaaaaaagttaatgaccaagactcatgctgaaatgcgt
gagccgcgggtacgaagaagattgagccgcatattaaaggaggtcaaaactgagtgtgga
gacagcgatgcttcatccgatgatgacgacatatcattatgggctccagcaccccaatcg
ccttcctcgccgacacccgccgtctcactcagagttcttcccagcctctccacccaagac
atgaagaccacggagggaatcgaactcggggagcaggatttgaaagccatgctgaataac
catcgggagaagaggaagcgacagccagatcatccggacttgatgacctctgacattcac
ctcggagacatactttcaagagcgaatatcggtcggaagggggctgtggccttttttgac
ctgtctctgccgaagaagaagatcaaagaagagagaaggaagaaaaaaatgaggacaata
aaagtggaagctgaggatccctgtgaaattcttgcaccttccgacaccccgtcggctcca
acgccgagcgtcgccaactccctgccagacaccccgtctaccccactggccaacatcaag
gaagaagttgtggaggagtgtccgagcagcccggttccagtggaggaaatagccatcagc
ttcttcagcttgttggagagcatcttgaggacagagcactttacaagcacgtcgttgttg
gaggagaaagttcaaatgtggcagtgctctccagccagctccctcaacgtgtggttctcc
tccgtcccgtgttggtccgacttggttcttcaagccctgcagtttctggcaggggagact
aaagatggcatgatggcactccccagtggattttctccatttgtggaatttgccgatgaa
tctcagcagtggaggtggatcggtcccactcaggatacagagaaggatctcagtgctctc
tgtcagctgtggctggactccaaagacttggttatcaagttggaaaatgaggacatgctg
gagatgacttctcccacaccaagagtctcgaccgactacgtggtgcggcccagcactggg
gacgagagacaagtgtttcaaattcaggagcagcagcgatacaaccagccacacaaagcc
ttcaccttccggatgcacggcttcgagtcggtggtggggccggtgaagggcgtgttcgac
aaggagatgtcgctcaacaaggcgcgagagcacacgctgctgcgctcggaccggccgccc
tacgtcaccatcctctctctggtgcgggacgccgccgccaggttacccaacggagaagga
acgcgggccgagatctgtgagctgctgaaggactcccagtttcttgctccagacgtcacc
agtgcacaggtgaacacggtggtcagcggcgccctggacagacttcactacgagaaggac
ccctgtgtgaagtacgacatcggacgcaagctctggatctacctgcaccgcagtcgcagt
caggaggagttcgagaggatccaccaggctcaagctgctgctgcgaaagcacgaaaagcc
ctgcaacaaaaacccaaacctgcatcaaagcctaagtctggaagtaaagagggaggcggt
aaaaccccgggaagtctggaggcgggacaggatgcggtctccattcccatgtcgccaacc
tcttcaacgcccaccctcaacacaccgggaacgcccaagtcccccttaacctgcccggca
accacaccaacaaagaccggagtccccgaggcaatcaaaaccagcaccggtgtcctcctc
gtgtcccccccctcgctgccccagctgggctccatcctgcccagcggtcaggccggtccg
ccggtggcgtcccaccacgcggctcgcctggtgagccacctggcggcgggctccctccct
caggtgcgggtggtttctgctccgccgggcctgggttctccgttagggggtcagcaggcc
acgctgctgcatcaggccccccaccagatcaggatgccggtgtccatggcaaccaagggc
atttcacaggcgatggtgtctgtgcctctgaggtctgccagtagtccagtccaggcgccg
accaccatatcggtgtccgccgtagctctcggcaaacctctcgcccgatcacccggtagc
ccggcccacaaccccggttcccccgcaaggctgcaagtagtcggcaacccgaatatcaaa
caggtgtccatcacggcgaccaacctgcgcatccagggcaaagacgtcctccgcctgccg
ccgtcctccatcaccacggactccaaagggcagacggtgctgcggatcaccccggacatg
atggccactctcgccaagtcgccggtcgcgaccgtcaaactcacgcccgacttcctgggc
ggcggcggcaagagcatctcggccactctccgcgtggcgccgccccactcctcggcttcc
tccgtctcctgcgccacatcctgcatcggggacgtccagaccaccaaagcgggcgccgtc
tcatccggcttgatgaaggccgcgggagacgccgccatacgcctgatgcccacgctggcg
gtgaccatggcggaccagaaatcccggagcttccccggcgtctcctcccccgacaagagc
ggcaccaccatccgcatcatgccgggactcggcgtcattccgcagaaacaaggtcagacc
atcaccatgacgaccaccacgggcagcaaaacgctcacgacgtgcgccaacgtcgtgacc
atggccgccagcgtggtgaccggggccaagggcctcaccgtggctccgggggtctcgtgc
tccactctgacgctcggcacgaccacggccaccgtgcgccaggtccctgctacggtggtc
accacgcaaccggggaagctaccggcccggatcacggtgcccctctccctcctcacccaa
cctctgaagaacaagagtgttgtgaccacaccgatggtgaagggaagtctcaacaccaac
atcagcagcctgggcaggaacatcatcctgaccacgatgcccgccggcaccaagctgatc
gccgggaacaaaccggtcagcttcgtcacggcgcagcagttccagcagctgcagcagcaa
ggacaggccacgcaggttcgcatccagacggtccaggcgcagcagctccagcagcacatg
gcgtccggctcccagaaatccgtttccacggtcgtagtcacaacggcgccgtcgcccaaa
tgtgcccccgaccccccgaccggaccccaacagtga
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