Pseudoliparis swirei (Mariana hadal snailfish): 130191907
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Entry
130191907 CDS
T09868
Symbol
b4galt4
Name
(RefSeq) beta-1,4-galactosyltransferase 4
KO
K07969
beta-1,4-galactosyltransferase 4 [EC:
2.4.1.90
2.4.1.275
2.4.1.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00533
Glycosaminoglycan biosynthesis - keratan sulfate
pswi00601
Glycosphingolipid biosynthesis - lacto and neolacto series
pswi01100
Metabolic pathways
Module
pswi_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
130191907 (b4galt4)
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
130191907 (b4galt4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130191907 (b4galt4)
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.90 N-acetyllactosamine synthase
130191907 (b4galt4)
2.4.1.275 neolactotriaosylceramide beta-1,4-galactosyltransferase
130191907 (b4galt4)
Glycosyltransferases [BR:
pswi01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
130191907 (b4galt4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
130191907
NCBI-ProteinID:
XP_056267624
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All DBs
Position
3:2442230..2448063
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AA seq
346 aa
AA seq
DB search
MGFCLPVCKTLRRGKYVLLLFVSLSVLAWIAALSGDTVKSALVFAPSPQTLIKADGLRDR
PNTEPPAPDRVETQTPKVECPKESPLLQGSVKLSFESSLTLKEVESQNKGVAEGEYEPSD
CTARQSVAVLIPHRSRERHLLYLLNHLHPFLQRQQLHYAIYVIQQAGDATFNRAKLLNVG
YLEALKDYSWECFIFHDVDLVPENDHNLYVCDDQPKHLVVGRNATGYKLRYKGYFGGVTA
MTKDQFHQVNGFSNTYWGWGGEDDDLRIRVELQKMKIVRPPADVARYTMVFHKRDSGNAI
NKDRMRLLGQTPLVWKKDGLNSCSYKTMSLERPPLYVNVTVDIGKP
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggcttctgtttgcctgtgtgcaagactttgcggagggggaagtatgtcctactcctc
tttgtctcgctgtcggtgctggcgtggatcgcagctctttcaggcgacacagtgaaatcc
gctctggtcttcgccccctcgccacaaactctcatcaaagccgacggtctgagggatcga
cccaacaccgagccgccggcgcccgatcgagtagaaactcaaacgccaaaagtggaatgc
cctaaggaatcgccattgctacagggctctgtgaagctgtcctttgaatcctctctgacg
ctgaaggaggtggagagtcaaaacaaaggcgtggccgaaggcgagtacgagccgtcggac
tgcacggcgaggcagagcgtggcggtgctcatccctcatcgcagcagagagagacacctc
ctctacctcttgaaccacctgcacccctttctgcagaggcagcagctgcactacgccatc
tacgtcatccagcaggctggtgacgcaacttttaaccgtgccaagttactcaacgtcggg
tatttggaggcactgaaggactacagctgggagtgcttcatcttccacgacgtggacctg
gttcccgagaacgaccacaacttgtacgtctgtgacgatcagcccaaacacctggtggtc
ggccggaacgccaccggatacaagctgcgctacaaaggctactttggaggcgtcacggcg
atgaccaaagaccagttccaccaagtgaacggattctccaacacctactggggttggggc
ggagaagacgacgacctccgcatcagggtcgagctgcagaaaatgaagatcgtgcggccg
cccgccgacgtcgctcgctacaccatggtgttccacaagcgggacagcggcaacgcaata
aacaaagacaggatgaggctgttgggacaaactcctctggtgtggaagaaggacggactg
aacagctgctcgtataagaccatgtcgctcgagaggccgccgctgtacgtgaacgttacc
gtggacatcggtaagccgtag
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