Pseudoliparis swirei (Mariana hadal snailfish): 130191936
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Entry
130191936 CDS
T09868
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130191936 (supt6h)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130191936 (supt6h)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
130191936 (supt6h)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
130191936 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
S1
Spt6_S1
HHH_9
S1_RRP5
HHH_3
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
130191936
NCBI-ProteinID:
XP_056267666
LinkDB
All DBs
Position
3:complement(6970769..6990115)
Genome browser
AA seq
1766 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPQKTQRFLEEDDEEEEENTEDQDERGNLRGLIDDGEEE
GEEEARPNASAAGSDSEEEVRHRRKKRNFDDRLDEDDLDLIEENLGVKVKRRKKKYDRVK
TLDDDEDDDDDQKDQIADEIFHGDTEGELEEGEAVDEPIHHADDEEEGEDEESDIDDFIV
DDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADNYDQGEEEDQDEEGWDRP
KKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAEDDELEE
EAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFEVPFI
AFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFRKMQSYQFEQISADPDKPL
ADGIRPLDTPDLERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNIAKPSKKRLKKIKEVT
EDGEEEELEVEVEEEDQKAPDLKLASRRDMYTICQSVGLDGLAKKFGLTPEQFGENLRDS
YQRHETEQFPAEPVELAKDYVCSQFSTPEAVLEGTRYMVAMQIAREPLVRHVLRQTFQER
AKINIKPTKKGKKEVDEAHFAYSFKYLKNKAVKELNGDQFLKMCLAVEEGLLSIDICIDL
IGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALTQFLYPQMAKELKSKL
ITEAKESIVRACCRRLYNWLKVSPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPSRDTP
VFCALINGEGEVVDFLRLPYFMKRRNAFKEDDREKKAFDIETLKKFLSGKKPHVVAVAGE
NRDAQMMMEDIKRAISELEQESSVPAVGVELVDNELATLYMNSKRSEVDFRDYPPLLRQA
VSIARKIQDPLIEYSQVCSSDEDILCLKLHPLQEHVVKEDLLCALYCEFINRVNEVGVDV
NKSIAHPHTQSLVQFVCGLGPRKGSQLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAG
FIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEIL
ENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVAYRVPNTEEVFNLL
TKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDNFPELSEVW
NHFDSGSCPGQAIGVRCRLDNGVHGFIPTKFLSDKVVKHPEERVKVGMTVHVRIMKIDIE
KFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTESEDQKHEEELKKKQQRTPYIKRVIAHP
NFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVAEGIYQHVDVREEGKENAFS
LGHTLWINTDEFEDLDEITARYIQPMASFARDLLGHKYFQDGLWGKKEKMEELLVKTKRE
KPTFIPYFLSACKDMPGKFILGYQPRGKPRVEYVTITPDGFRYRSQVFPTVNGLFRWFKD
HYQEPVPGVTPSNSSRTRTPASLNATPANINMADLTRAVNALPRNMTSQMFSAIASVTGQ
GQNPNTTPAQWGSSQYGYGGSTGGQGGGGGGSSSAYHVFSTPQQPIATPLMTPSYSYTTP
SQQALGTPQYSSSTPQSSHSHSHGPPHGGSSHGSHHSHPDHSGHHSHSSGTPTSSTSSRG
RTPQQQTQTQPQTQQQQPPVAPKASGSNASAVDWGKMAEQWLKEKEAEGRKKTQRMTPRP
SPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttattgagagcgaggctgaggagtcagaggaggagtttgaagagaaagac
ctcaaaccccaaaagacccagaggtttttggaggaagatgatgaagaggaagaagagaac
acagaagaccaggatgagcgaggaaatttacgtggactcattgatgatggagaggaggaa
ggggaagaggaggcacgtccaaatgcaagtgcagcagggagtgactcagaagaagaagtt
cggcatcgccgaaaaaagcgcaattttgacgaccgcctcgatgaagatgatctagaccta
attgaggaaaacttgggtgtaaaagtgaaacggaggaaaaagaaatacgaccgtgtaaaa
acgcttgatgatgatgaagacgatgatgatgaccagaaggaccagatcgcagatgagata
tttcatggtgatacagagggagagctagaggaaggcgaggctgtcgatgagcctatccac
cacgcagatgatgaagaagaaggagaggacgaggagtcagatatagacgattttattgtt
gatgatgatggccaacccatcaccaaaaagaggggcaagaaattctcaggatacacagac
gcagccctccaggaggcccaagaaatatttggtggagactttgactttgctgacttcgat
gcagacaattacgaccagggggaggaagaggaccaggatgaagaaggttgggaccgaccc
aagaagcagacgaagaggaggcaggggaggaagagcatctttgagatctacgagcccagt
gagctggaaagtagtcacatgactgaccaagacaatgagatccgctctacagatatgccc
gaaagatttcagttacgatccatccctgttaaacctgctgaggatgatgagctggaagag
gaagcagagtggatcttcagacatggcttctccactcttactatctccatgcaggagagc
acagattatctagacaggggaacaaccacaaacttcagcaggaaaggccctagcacaatt
gctaagattaaagaggccctcaacttcatgaggaatcaacaatttgaggtcccattcata
gctttctacaggaaagaatatgtggagcctgagctaaacatcaatgacctgtggaaagtg
tggcagtgggatgaaaagtggactcaactgaagacacggaagcagaacctgacccgtctg
tttcgaaagatgcagtcttaccagttcgagcagatctcagccgaccctgacaagcctttg
gctgacggcatccgtcctctggacacccctgacctggagaggctaaaagatgtgcagact
ctcgaagagctgggtgatgtgtacaaccactttctgctttactacggccgagacatcccc
aagatgcagaatattgccaagccgagtaagaagaggctcaagaagatcaaagaagtgaca
gaggatggtgaagaagaagaattggaggtagaggtagaagaagaagatcagaaagcacct
gacctcaagctggcgtctcgtagagatatgtacaccatctgtcagagcgtgggacttgat
ggcctggctaaaaagtttgggttaactccagagcagtttggagaaaatttgagagacagt
taccagcgtcacgagaccgagcagttcccagctgaaccggtagagctcgccaaagattat
gtttgcagtcagttcagcactcctgaggcagtgctggagggaaccaggtacatggtggcc
atgcagattgcgcgtgaaccgctggtccgacatgttctccgacagacctttcaggagagg
gccaagatcaacatcaagccgacaaagaagggcaaaaaggaggtagacgaggctcatttt
gcctactccttcaagtatcttaagaacaaggccgtaaaagagctgaatggggatcagttc
ttgaagatgtgcctggcagtggaggaggggctgctttccattgacatctgtatcgacctt
atcggggtcaaagggtatgctggggaccagacatactttgatgagatcaaacagttctac
tacagggatgagttcagtcaccaggtgcaggaatggaacaggcagcgtactctagccata
gagagagcgctcacccagttcctctacccccagatggccaaggagctcaagagcaaactg
atcactgaggccaaagagagcatcgtcagggcctgctgccgtcggttgtacaactggctc
aaggtgtctccttaccgaccagaccagcaggttgaggaagacgatgatctgatggatgag
agtcagggcaaaggcatccgggtgctgggtgtagcctacgcgcccagcagagatacacca
gttttctgtgctctgatcaatggggaaggggaggtggtcgacttcttgcgtctgccctac
ttcatgaagaggaggaatgcctttaaggaggatgacagagagaagaaggcctttgacatc
gaaactctcaagaagtttctgtccggcaagaaacctcatgtggtagctgttgctggggaa
aaccgagatgctcagatgatgatggaggacatcaagagggcgatcagcgagctggagcag
gagtcctctgtgccggctgttggtgtggaacttgttgacaatgagttggcgacactgtac
atgaacagcaagagatctgaggttgattttagggattaccctcccttactgcgacaggct
gtgtcgatagccaggaagatccaggatcccctgattgagtattctcaggtgtgcagctct
gatgaagacattctctgcctcaaacttcacccactgcaggaacatgtggtgaaggaagat
ctgctctgtgctctttactgtgaattcatcaaccgggtaaatgaggttggagtggatgtg
aacaagtccattgcccatcctcacacgcagagcctcgtccagtttgtctgtggactgggg
ccaagaaagggctcccaactgctcaagattctgaagcagaataacactcgacttgaaaac
agaactcagctggtcacaatgtgtcacatgggccccaaagtttttatcaactgtgccggt
ttcatcaagatcgacacagcatcgcttggggacagtactgactcgtacattgaggttctg
gatggatctcgtgtccaccctgagacgtacgagtgggctcgcaagatggctgtggacgct
ctggagtacgatgagtcggcagaagacgccaacccagccggagctctggaggagatcttg
gaaaatccagaacgtctcaaagatctggacttggatgcctttgctgaagagcttgagaga
cagggttacggcaacaaggggatcactctgtatgatatccgagcagagctgagctgcaga
tacaaagacctgagggtcgcctacagagtccccaacactgaggaggtcttcaacctgctc
accaaggagactcctgagaccttttatattggtaagctgatcaccagtatagtaactggt
attgctcaccggcggcctcagggagagagctatgaccaggccatccgtaatgattctacg
ggcctgtggcagtgtcccttctgccagcaggacaacttccctgaactcagtgaggtgtgg
aatcactttgacagcggctcatgtccaggtcaggccattggggtgcggtgcagattagat
aatggcgtccatggattcattcccaccaagtttctcagtgacaaagtggtcaaacaccct
gaggagagggtcaaggtgggcatgacagttcacgttcgcatcatgaaaatcgacattgaa
aagttcagcgtcgacctcacatgccgcacctcagatttgatggacaaggctaatgagtgg
aagctccccaaagacagctactatgactttgacacggagtccgaagaccaaaagcatgag
gaggagctcaagaagaaacaacagcgaacaccatacatcaagcgtgtgattgcccacccc
aacttccacaatattagtttcaaccaggcagagaagatgatggagaccctggaccagggg
gacttgatcatcagacccagcagcaagggagagaaccacctcacagtcacctggaaggtg
gccgaaggcatctaccaacatgtggatgtgagagaagaaggcaaagagaacgcgttcagc
ttggggcacactctctggatcaatactgacgagtttgaagatctggatgaaatcactgct
cggtacattcagccgatggcgtcatttgccagggatctactggggcataagtacttccag
gacggcctctgggggaaaaaggagaaaatggaggagttattggtcaagacaaagagggag
aagcctactttcatcccctactttctttcggcgtgtaaagatatgccagggaaattcata
ctgggctaccagcctcgcggaaaaccacgggtcgagtatgtgaccatcaccccggacggc
ttccgctatcgttcacaagtattcccgacagtgaatggactattccgttggtttaaggac
cattaccaagagcctgtgccaggcgtcactcccagcaacagcagccgaacaaggactccc
gcgtccctgaacgccaccccagccaatatcaacatggcagacttgacgcgagctgtcaac
gccctcccacgcaacatgacctctcagatgttcagtgccatcgcctcagtcacaggccag
ggccagaaccccaacaccacccccgcacagtggggctccagccagtatggctacggtggc
agcacaggaggacaagggggaggagggggggggagctcctctgcttatcatgtattttcc
acgcctcagcagcccattgcgactcccttgatgacgcccagctactcttacaccacgccg
agccagcaggcgctgggcacgccgcagtacagcagctccaccccgcagtcctcacactct
cactcgcacggccctccacacggcggcagcagccatgggtcacaccacagccatcccgac
cacagcggtcaccacagccactcatccggtactccgacatcctcgacctcatccagagga
aggacaccgcagcagcagacgcagactcagccgcagacgcagcagcagcagccgccggtg
gcgccaaaggccagcggcagcaacgcctccgcagtggactggggcaagatggccgagcag
tggctgaaggaaaaagaagcagaggggcggaagaaaacccagaggatgacgccgcggccg
tcgcccagcccgatgatcgagagcacgcccatgtccatcgccggagacgccacgcccctc
ctggacgagatggaccgatag
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