Pseudoliparis swirei (Mariana hadal snailfish): 130191944
Help
Entry
130191944 CDS
T09868
Name
(RefSeq) calpain-5-like
KO
K08574
calpain-5 [EC:3.4.22.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130191944
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C2: calpain family
130191944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
C2
Motif
Other DBs
NCBI-GeneID:
130191944
NCBI-ProteinID:
XP_056267681
LinkDB
All DBs
Position
3:1936261..1951970
Genome browser
AA seq
643 aa
AA seq
DB search
MFSSATPYKNQHYSQLKNDRINDKTLFEDPEFPATDASLYFKRPPPGMVEWKRPAEISND
PYLFVKGISSHDLNQGVVGNCWFVAACSCLALKPDLWKKVIPDHMAQEWDHKHPEKYAGI
FHFQFWVFGEWVDVVVDDRLPTINGELIYCHSKDNNEFWSALLEKAYAKLSGCYESLDGG
NTGDAVVDFSGAVAEAIDLEKEAYYKDQKKQDQLLEDLLKVYDRGGIISCSIKASPNEIE
MEMANGLVKGHAYSVTAVKKVRVGHGLLAYVKNETIPLIRMRNPWGKTEWKGAWSDSSEE
WSTVGDMERANLGITVEDDGEFWMEFTDWCKLFSNADICRLINTSVISVYKTWNEVVHFG
SWTKNAEPLLNRCGGCANHKLTFLQNPQFLFDVTKEADEVLISLQQKDMKSHRKYGRGEN
LSIGFAIFKVELNRKYRMHDILTQGCVETSTYINARTVFMRCTLQQGRYVIIPTTFEPLT
LGDYMIRVYTDVDSGCRELTEDKPKINCWSSFVGYPQAVTHVYVHGAEELQNQDRAGGAD
PYVIISCEGRSVRSTVKTDTLQPEFLTSAIFYRKKPRKPVTVQVWNSNGVKDEFMGQVVL
SGSVKDTYEPQRLQLRKRGRQSADEMPGSISLRIATSTQLTAM
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttctcctccgctaccccgtacaagaaccagcactactcccagctgaagaacgaccgc
atcaacgacaagacgctcttcgaggaccccgagttcccggccaccgatgcctcgctgtac
ttcaagagaccccctcccggaatggtggagtggaaacgaccggcggagataagcaacgat
ccctatctgttcgtgaagggcatcagctcccacgacctgaaccagggagtggtggggaac
tgctggttcgttgccgcctgctcctgcctggctctgaagccggacctctggaagaaggtc
attcccgatcacatggcccaggagtgggatcacaaacacccggagaagtatgctggaatt
ttccactttcagttctgggtgtttggagagtgggtggacgtggtggtggacgaccggctg
ccgacaatcaacggcgaactcatctactgtcactcgaaagacaacaacgaattctggagc
gctctgctggagaaggcctacgccaagctctccggctgctacgagtctttggatggggga
aacaccggagacgccgtggtggatttcagtggcgccgtggctgaagccatcgacctggag
aaagaagcttactacaaggaccagaaaaaacaagaccagctgttagaggatctgctcaag
gtctacgaccgcggaggaatcataagctgctcaattaaggcaagtccgaatgagattgaa
atggagatggccaacgggctggtgaaaggccacgcgtactctgtgaccgcggtgaagaag
gtgcgcgtgggtcacgggctgctggcctacgtcaagaacgaaaccattcctctgatccgc
atgaggaacccctggggcaagaccgagtggaaaggggcctggagtgacagctccgaggaa
tggtcgacggtcggcgacatggagagggccaatctcggcatcacggtggaggacgatggg
gagttctggatggagttcacggactggtgcaagttgttttcgaacgccgacatctgccgc
ctcatcaacacgtctgtgatcagcgtctacaagacgtggaacgaggtcgtgcactttggc
agctggaccaagaacgcagagccgctcttgaaccgctgcggcggctgtgctaaccacaag
ctaacgttcctgcagaaccctcagttcttgttcgatgtgacgaaggaggccgacgaggtc
ctgatttctttgcaacagaaggacatgaagagccacaggaaatatggacggggggagaat
ctcagcatcggcttcgctatcttcaaggtggagctgaacaggaagtatcggatgcacgac
atcctgacccagggctgcgtggagacgtccacctacatcaacgcccgcacggtgttcatg
aggtgcacgctgcagcagggccgctacgtcatcatccccaccaccttcgagccgctcacg
ctgggcgactacatgatccgagtgtacaccgacgtggactcgggctgcagggagctgacg
gaggacaagcccaaaatcaactgctggagctccttcgtcgggtacccacaagctgtgact
cacgtctacgtccacggagccgaggagctgcagaaccaggaccgcgcaggaggtgccgac
ccctacgtcatcatttcctgtgagggccggtccgtccggtccaccgtcaagacggacacc
ctgcagcccgagttcctcaccagcgccattttctacaggaagaaacccaggaagcccgtc
accgtgcaggtgtggaacagcaacggcgtgaaggacgagttcatgggccaggtggtgctg
tccggctcggtgaaggacacctacgagccgcagcggctgcagctgaggaagcgaggccgg
cagtcggccgacgagatgcccggcagcatcagcctgaggatcgccacctccactcagctg
accgccatgtga
DBGET
integrated database retrieval system
