Pseudoliparis swirei (Mariana hadal snailfish): 130191985
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Entry
130191985 CDS
T09868
Symbol
robo4
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130191985 (robo4)
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
ROBO family
130191985 (robo4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
BiPBP_C
C1-set
fn3_4
Motif
Other DBs
NCBI-GeneID:
130191985
NCBI-ProteinID:
XP_056267764
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Position
3:18616211..18636816
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AA seq
1080 aa
AA seq
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MSCGALTFVMASVCARLLLPGSRVHAQETPPRIVHHPADVVVKVGNPATLSCRADGSPKP
TIEWLRNGRPLEKGDGQLQPIVLSEGSIFFLSVGGGKRGQSHEGVYTCVARSSAGKATSR
NASLYIAVLQEEFSLQPSDVEVAEGEVAVLNCGPPIGHPEPNIIWKKNGLAIDNTDHHYT
ELSGKLIIAPAEKKHSGAYVCVASNTGGVRESRAARLSVLAKPALVLKPDDVSVRTGESA
QFYCQARGDPPPAVAWSREQGPLPNGRYLVNPDHTLQIHYVTAQDAGKYTCTAVNDAGVV
TGSAQLLVEEATSTQQRDLHKELSALRVALENVTIVAPGSNISRVQWKLQSLTDQPHYLD
GFEVLYRSLLPASSDWAAKRVALPSFQAPVGPLKRGYKYEFKVRPYGSNLYGRESNTRHL
RVPETVPSAPPMAVSITVSHEQNDTIHLSWGPPPHETHNGLIQGYQVFCVESEEQQYQNW
TVDSGQHNLDISTLKPGRRYWISIAAVNGAGVGMLSDPHGFVINPQIGGAPGSDVQRQDL
SRVLALLQDPVLIGSIAALLWSVLMVAAVFLFRRHNRTSHLIPGRGRAKGLRRLASEDLI
IKHRMAAPDSPWISGGWRPAFNQKYQDLWAHGQKHPGLRGTSLPTSWKDLGRVDSAVPIV
TDSCGVYGTFYMDLMGSGLKTFNSPRCGPKMSHGPPHQQGVETIQIFPQPVGKTPPLGSV
EALPWKQAIRPQPKMGVLRESWDKSHSKQELHAVNSVPIVPTRSQACSSRLYKQRLSHVP
SGRHECDQVAGCPRLLHYSASLHLVDMLPPPPPLPMEDTHSFSSDEGSSRSTGLTGVMSS
LPSVCAVSGRRGQPRAAAHSCSSCSPPSTRSYSSSVDGEQGGTLTAQEAAVYLELSPKPE
RCSSALPEQHPSLPHPFSPSLGYTCGPVQSDGDPAGGEPEYPPIGSRRARLQSTPSSCFS
EWDSLLWNTWSSVADSNMASARSSLISSVDSCSTNDSAHLHHLAHLARLLAAARAAETAS
GASLSDFSPPASPLSASYPSFRAEGDSLGELEPVPAWDWSSAWVEDMEARCRAHYPGGEY
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcggggctctcaccttcgtgatggcctcagtgtgcgcgcgtctgctcctgcca
ggttccagagttcatgcacaggagacgccgccccgcatcgtccaccacccggccgacgtg
gtggtgaaagtggggaatcccgccacgctctcctgccgggccgatggcagccccaagccg
accatcgagtggctgcgcaacggccggcctctggagaagggagacggacagctgcagccc
atcgtcttatcggaggggagcatcttcttcttgagcgtgggggggggcaagcggggtcag
tcgcacgagggcgtctacacctgtgtggcccggagcagcgccggcaaggccaccagccgc
aatgcatcactgtacatcgcagtgttgcaggaggagttcagtttgcagcccagtgacgtg
gaggtggcagagggggaggtggcggtcttgaactgtggcccccccattggacaccctgag
cccaatatcatctggaagaagaatggcctggccatcgacaacaccgatcaccactacact
gagctgagtgggaagctcatcatcgctccggcagagaagaagcactcgggtgcctacgtg
tgcgtggccagcaacaccgggggagtgagggagagcagggcggctcgcctctccgtgctg
gccaagccggcgttggtgctgaagccggacgacgtgtctgtgagaacgggggagtctgcc
cagttctactgccaggctagaggggaccccccgcctgctgtggcgtggagccgagagcag
gggccactgcccaacggcaggtatcttgtaaacccggaccacactctgcagatccactac
gtgacagcccaggatgctgggaagtacacctgcaccgctgtcaatgatgcaggtgtggtc
accggcagcgctcagctcctagttgaagaggctactagcactcaacagagagacctccac
aaagagctgtcagcactgcgagttgctctggaaaacgtcaccatcgtggcccctgggtcc
aacatatcgcgagtacaatggaagctccagtcccttacggaccagccgcactacctcgac
ggctttgaggtgctctatcgctctctgctgcctgccagctccgactgggcagccaagagg
gtggctctgcccagcttccaggctccagtgggccccctgaagaggggctacaagtacgag
tttaaagtccggccctacggcagcaacctgtacgggagggagagcaacacccggcacctc
agggtccccgagacggtgcccagtgcccctccaatggctgtgtccataacagtgagccac
gagcagaatgacaccatccatttgagctgggggcctccccctcacgaaacccacaacggt
ctcatacagggataccaggtgttttgtgtggagtctgaggagcagcagtaccagaactgg
acagtggacagcggccaacacaacctggacatctccaccctgaaaccagggagacggtat
tggatctccatagcagctgtcaacggggctggagtgggaatgctgagcgaccctcatgga
tttgtcatcaacccacaaataggcggtgcccccgggtcagacgtccaaagacaggatctg
tccagggtcctggccctgcttcaggacccagtgttgatcggaagcatcgccgccctcctg
tggagcgttctgatggtggcggctgtcttcctcttcagacgccacaacaggacaagccac
ctgataccaggacggggccgggccaaaggtttgcgcagactagccagtgaagacctcatc
ataaagcacaggatggcagctccagactccccctggatctctggaggctggagacctgcc
ttcaaccagaagtatcaggacctctgggcccacggtcagaagcatccaggactcaggggc
accagcctcccgacctcctggaaggacctgggccgcgtggactcggccgtccccattgtg
accgacagctgcggcgtttacggcacgttctacatggacctgatgggcagcggcctcaag
accttcaacagtcccaggtgtggccccaagatgtctcacgggccgccccaccagcaggga
gtcgagaccatccagatattccctcagcctgtcggcaagaccccgcccctcggcagcgtg
gaggcgctgccgtggaaacaggccataagaccccagcccaagatgggtgtgctgagggag
tcgtgggataaaagccacagcaagcaagagttgcatgccgtgaacagcgtccccatcgtg
ccaaccaggagccaggcgtgttcctccaggctctacaagcagagactcagtcacgtcccg
tcaggccggcacgagtgtgatcaagtggccggctgccctcgcctgctgcattactctgca
tcactacacctagtggacatgctgccccccccaccacctctgcccatggaggacacacac
agtttctcctcagatgaaggctccagtcggtcgacggggctcacgggggtcatgagctct
ctcccgtcggtctgtgccgtgtcgggtcgccgtgggcaaccgcgagccgccgcccacagc
tgctcctcctgcagccccccgtccactcgctcctactcctcgtccgtggacggagaacag
ggcggcacgctgacggcacaggaagccgccgtgtatctggagctgagccccaaacctgag
agatgcagcagcgccttgccggagcagcacccctcgctgcctcaccccttctcccccagc
ctgggctacacctgcggcccggtccagtccgacggcgaccccgctggcggtgagcccgag
tacccgccgatcggctcgcgacgcgcccgcctccagagcacgccctcctcctgcttcagc
gaatgggacagcctgctgtggaacacgtggagctccgtcgccgacagcaacatggccagc
gctcgctccagcctcatcagctcggtggacagctgctccaccaacgacagcgctcacctc
caccacctcgctcacctcgcccgcctgctggcggcggcgagggcggcggagaccgcgagc
ggagcctctctgtcagacttctccccgccagcctcccccctcagcgcctcgtacccgtcg
ttccgtgcggagggcgactcgctcggcgagctggagccggttcccgcgtgggactggagc
tcggcctgggtggaggacatggaggctcggtgcagagcccactatcctggcggggaatac
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