Pseudoliparis swirei (Mariana hadal snailfish): 130192014
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Entry
130192014 CDS
T09868
Name
(RefSeq) lissencephaly-1 homolog A-like
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00565
Ether lipid metabolism
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
130192014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130192014
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130192014
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130192014
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130192014
BRITE hierarchy
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
LisH
eIF2A
Nucleoporin_N
Pox_A_type_inc
ARMC9_LisH
LisH_2
DUF6813
DUF2570
Motif
Other DBs
NCBI-GeneID:
130192014
NCBI-ProteinID:
XP_056267814
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All DBs
Position
3:complement(7277856..7291044)
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AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEVELDMNEEIDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTHGGPVGQKRDPKEWIPRPPERYALSGHRAPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMSIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVVGSKECKAELREHEHVVECIAWAPDSAHPTILEATGSE
SKKSGKPGPFLLSGSRDKKIKMWDISIGICIMTLEGHDNWVRGLLVHPGGRFIVSCADDK
TIRIWDFKNKRCMKTLYAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcccagagacaacgagatgaactaaaccgggctatagccgactatctccgt
tccaatggatacgaggaggcatattccaccttcaagaaagaggttgagctggatatgaat
gaagagatagataaaaagtatgcaggccttttggaaaagaaatggacctcagtcatcaga
ttacagaagaaggtgatggagctggaatctaagttgaatgaggcgaaggaagagatgaca
catggtgggcctgttggtcagaagagagaccccaaggagtggatcccccgccccccagag
agatacgccctgagcgggcaccgtgccccggtcacacgggtcatcttccaccccgtcttc
tccgtcatggtcacggcctccgaggatgctaccatcaaggtgtgggactatgaggcgggg
gactttgagcgaaccctgaagggccacacggattctgtgcaggacatctccttcgaccag
acggggaagctgctggcttcgtgctcagctgacatgagcatcaaactttgggacttccag
ggctttgagtgcattcgaacgatgcatggccacgatcacaatgtgtcgtcggtagccatc
atgccaaatggtgaccacatagtttcggcctccagagacaagaccatcaagatgtgggag
gtggccactgggtactgtgtgaagacctttacgggccacagggaatgggtgaggatggtg
cgtcccaaccaggacggctcgttgatcgccagctgctccaacgaccagacggtgcgcgtc
tgggtggtcggctcgaaggagtgcaaagccgagttgcgggagcatgaacatgtggtggag
tgcatcgcctgggcccccgactcggctcaccccaccatcctggaggccacaggctctgag
agcaagaagagtgggaaacctggccccttccttctctccggatctagagataaaaaaatt
aagatgtgggacatcagcattggcatctgcattatgactctggagggacacgacaactgg
gtgcgcgggttgttggttcatcctggaggaagattcatcgtgagctgtgctgatgacaaa
accattaggatctgggacttcaagaacaaacgctgcatgaagaccctttatgcccatgaa
cactttgttacctctctggatttccacaagactgctccctacgtggtgacgggcagtgtc
gatcagacagtcaaagtctgggagtgccgctga
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