Pseudoliparis swirei (Mariana hadal snailfish): 130192014
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Entry
130192014 CDS
T09868
Name
(RefSeq) lissencephaly-1 homolog A-like
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00565
Ether lipid metabolism
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
130192014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130192014
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130192014
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130192014
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130192014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
LisH_PAC1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR41
CFAP251_N
Beta-prop_DCAF4
NBCH_WD40
ASA1
Beta-prop_Vps41
Beta-prop_EML
WDR90_beta-prop_4th
PAC11
Beta-prop_Nup120_160
TRM82_WD
LisH
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
eIF2A
Beta-prop_RIG_1st
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Nucleoporin_N
LisH_SSDP
Pox_A_type_inc
Beta-prop_NUP159_NUP214
Beta-prop_WDR11_2nd
LisH_UCP007778
ARMC9_LisH
LisH_2
SutA-RBD
NEAP
Motif
Other DBs
NCBI-GeneID:
130192014
NCBI-ProteinID:
XP_056267814
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Position
3:complement(7277856..7291044)
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEVELDMNEEIDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTHGGPVGQKRDPKEWIPRPPERYALSGHRAPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMSIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVVGSKECKAELREHEHVVECIAWAPDSAHPTILEATGSE
SKKSGKPGPFLLSGSRDKKIKMWDISIGICIMTLEGHDNWVRGLLVHPGGRFIVSCADDK
TIRIWDFKNKRCMKTLYAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcccagagacaacgagatgaactaaaccgggctatagccgactatctccgt
tccaatggatacgaggaggcatattccaccttcaagaaagaggttgagctggatatgaat
gaagagatagataaaaagtatgcaggccttttggaaaagaaatggacctcagtcatcaga
ttacagaagaaggtgatggagctggaatctaagttgaatgaggcgaaggaagagatgaca
catggtgggcctgttggtcagaagagagaccccaaggagtggatcccccgccccccagag
agatacgccctgagcgggcaccgtgccccggtcacacgggtcatcttccaccccgtcttc
tccgtcatggtcacggcctccgaggatgctaccatcaaggtgtgggactatgaggcgggg
gactttgagcgaaccctgaagggccacacggattctgtgcaggacatctccttcgaccag
acggggaagctgctggcttcgtgctcagctgacatgagcatcaaactttgggacttccag
ggctttgagtgcattcgaacgatgcatggccacgatcacaatgtgtcgtcggtagccatc
atgccaaatggtgaccacatagtttcggcctccagagacaagaccatcaagatgtgggag
gtggccactgggtactgtgtgaagacctttacgggccacagggaatgggtgaggatggtg
cgtcccaaccaggacggctcgttgatcgccagctgctccaacgaccagacggtgcgcgtc
tgggtggtcggctcgaaggagtgcaaagccgagttgcgggagcatgaacatgtggtggag
tgcatcgcctgggcccccgactcggctcaccccaccatcctggaggccacaggctctgag
agcaagaagagtgggaaacctggccccttccttctctccggatctagagataaaaaaatt
aagatgtgggacatcagcattggcatctgcattatgactctggagggacacgacaactgg
gtgcgcgggttgttggttcatcctggaggaagattcatcgtgagctgtgctgatgacaaa
accattaggatctgggacttcaagaacaaacgctgcatgaagaccctttatgcccatgaa
cactttgttacctctctggatttccacaagactgctccctacgtggtgacgggcagtgtc
gatcagacagtcaaagtctgggagtgccgctga
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