Pseudoliparis swirei (Mariana hadal snailfish): 130192024
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Entry
130192024 CDS
T09868
Name
(RefSeq) F-box only protein 40-like
KO
K10315
F-box protein 40
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130192024
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130192024
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
Sina_ZnF
F-box-like
Motif
Other DBs
NCBI-GeneID:
130192024
NCBI-ProteinID:
XP_056267830
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Position
3:complement(7315651..7321180)
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AA seq
695 aa
AA seq
DB search
MTQRSRASRARQHVHCDSCYSRRCRARVEVSVCCALIPCRLHCGALFHLCKEEDHLLLCP
SVRVPCLNADYGCPLHLPRSSQAAHLQACPASVVCCSMEWLRWPTDDTNPCENVALQETV
LQEIQGQGQPLDLATALVDQSDLYDRLKMKPLFPELIEADEEEIKDGKKEETAIGGGSVN
GVTDNECIVISVLSLHAAVLNVDDVTPQNGEVGQVSGISKGNYDMCEMMFGMEKGGCAVA
QANQDNPKPGEEVKLLGDKDKTGQAPWHEGVLERLRQELSPQEFNMYVMHHGRMLLTFGK
INACTPREDDFVYGSLEPIPVQTLHSFKIPDGYHYSQRRAHHYDTSRPPSEPRGVDTSDL
VFKVEDGFSDEAAATLLGYAEMEVRGHKISESSAYDGLYVDVATQTHAFRAAPFKAGTTL
AEVVVDRPPKLRLQLQSERVNSRNTRAGCVFAFLCGHSFHRREFPSHFRNVHSDIQTSLS
GWFEQRCPLSYLGCTYSQRRFQPSTHGATVSYDRQLRSFNLRPTLAASGGDDSQASGSSV
DSSATRRRRGGRGGGGEDSLSSLPYEVLCHMARFLDSLSLSQLALASQLMRQVSSSLLQE
RGMVTLRWEKKTDSHGGAKWRAKPVWEFSHLFSSVDSWHMADIPPISVHLKVCPYYETSL
HSDPVALSGMSDRQEGSQEERQSLVDHFARNRLQQ
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgactcagcgttctcgggcctccagggcgcgacagcatgtccactgtgattcctgctac
agccggcgctgcagggcccgggtggaggtctctgtgtgctgtgcgctcatcccctgccgc
ctccactgtggagcgctcttccacctttgtaaagaggaggatcacctgctgctctgcccc
agcgtgagggtgccctgcctcaacgccgactacggctgcccgctccacctgccccgctcc
tcgcaggccgctcacctccaggcgtgtccggccagcgtcgtgtgctgctccatggagtgg
ctccgctggccgaccgatgacacaaacccatgcgaaaacgtcgccctgcaggagaccgtg
ctgcaggaaatccaggggcaggggcagcctctggatcttgccacggccctcgtggatcag
tcggacctttatgatcgcctgaaaatgaagcctctctttccagagctgatcgaagcagac
gaggaggaaataaaggacgggaagaaagaggagacggcaataggaggagggtctgtcaat
ggtgtcacagacaacgaatgcattgtaatctctgttctttctcttcacgcagctgttctt
aacgtcgacgacgtgactccgcagaacggtgaagtgggccaagtctcgggcatcagcaaa
gggaattacgacatgtgtgagatgatgttcggcatggagaaaggcggctgtgccgttgct
caggcaaaccaggacaatccaaagcccggtgaggaggtcaagcttcttggagacaaagat
aagacaggacaggccccgtggcatgagggggtgctggagcgcctgaggcaggagctcagc
ccgcaggagttcaacatgtacgtgatgcatcacgggcgcatgctgctgaccttcggaaag
atcaacgcctgtacaccgagggaagacgattttgtctacggcagcctggagccgatccca
gtccagaccctgcactctttcaagatccctgacggctatcactacagccaacggcgggct
catcactacgacacctctcggcctcccagcgagcctcgcggtgtggacacatccgacctg
gtgttcaaggtcgaggacggcttcagcgatgaagcagcagccaccctgctgggctatgcc
gaaatggaggtcaggggtcacaagatcagcgagtcgagtgcctacgacgggctttacgtc
gacgtggcgacgcagacgcatgctttccgcgcggcgccatttaaagcggggacgaccctg
gccgaggtggtcgtcgacaggccgccgaagcttcgtctgcagctgcagtcggagagggtg
aacagcagaaacaccagagccggctgcgtcttcgccttcctctgcggtcacagcttccac
cgccgggagttcccctcacatttcaggaacgtccacagtgacatccagacgagtctgagt
ggatggtttgagcagaggtgccccctgtcctacctgggatgcacctacagccagaggagg
tttcagccctccacacatggagccaccgtctcctatgatcggcagctgaggagtttcaac
ttgcgtccgacactcgcagcctcaggaggtgacgactcccaggcgtccgggagctcagtg
gactcctccgccactcggaggaggagaggaggccgtggaggaggaggggaggactctctg
agctcgctgccctacgaggtgctgtgccacatggcccgtttcctggacagtctgtccctg
tcccagctggctctggcgtcccagctgatgaggcaggtgagctcctctctgctgcaggag
agagggatggtcaccctgcgctgggagaagaagaccgactcacacggaggagccaagtgg
agagccaaaccggtatgggagttcagtcacctcttctcctcagtggattcgtggcatatg
gcagacatccctccaatatctgtccatctaaaagtctgtccttactacgagacctctctg
cacagtgaccctgttgccctctcgggcatgagtgacagacaggagggcagccaggaggag
aggcagagcctcgtcgaccattttgcaagaaacagattgcaacaataa
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