Pseudoliparis swirei (Mariana hadal snailfish): 130192042
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Entry
130192042 CDS
T09868
Symbol
crx
Name
(RefSeq) cone-rod homeobox protein
KO
K18490
homeobox protein OTX2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130192042 (crx)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130192042 (crx)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
130192042
NCBI-ProteinID:
XP_056267859
LinkDB
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Position
3:complement(15738137..15741122)
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AA seq
295 aa
AA seq
DB search
MMSYIKQPHYTMNGLNLPGPGMDVLHTTIAYPSTPRKQRRERTTFTRTQLDILEALFSKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQSKPRPPKKKASPLQEPS
IPDPVPNPSGSYSPSSVQSGPGLVPSSSTGNTGVSIWSPAISPLPDPLASSSAPCMQRPS
PYPMSYGQPSAYTQGYASTTSYFTGLDCSAYLSPMHSQLSGTVGALSPIAVPSMGGSLSQ
SPASLSSQGYSTASSLGFTSVDCLDYKDQQAWKLGFTTMDCLDHKDQNSWKFQVL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacataaagcaaccccattacaccatgaacgggttaaatttgcctggcccc
ggaatggatgtgctgcatacaaccatcgcttatccatccactccccggaagcagcgcagg
gagcgcaccaccttcacccggacacagctggacatcctggaggcgttgttctccaagacc
cgctacccggacatcttcatgagggaggaggtggccctcaagatcaacctgcccgagtca
cgtgtgcaggtgtggtttaaaaaccggcgtgccaagtgccgtcagcagcagcagcagagc
agtggccagtccaagccccgccctcccaaaaagaaggcctccccgttgcaggaacccagc
atccctgatcctgtccctaacccgtctggttcctacagcccctcctctgtccagtccggc
cccggcctggttccgagctccagcaccgggaacaccggcgtgtccatctggagcccggcc
atctcgcccctgcccgaccccctggcctcctcctcggccccctgcatgcagcggccctca
ccttaccccatgagctacggccagccgtcggcctacacccaaggctacgccagcaccacc
tcctacttcaccggtctggactgcagcgcctatctgtcccccatgcactcgcagctgtcg
ggcaccgtgggcgccctcagccccatcgccgtgccctcgatggggggctccctgagccag
tccccggcctcgctgtcctcgcagggctacagcacggcctcctccctgggcttcacctct
gtcgactgcctggactacaaggaccagcaggcctggaaactgggcttcaccacaatggac
tgcctggatcacaaggaccaaaactcctggaagttccaggtcctctag
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