Pseudoliparis swirei (Mariana hadal snailfish): 130192049
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Entry
130192049 CDS
T09868
Name
(RefSeq) cytotoxic and regulatory T-cell molecule
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130192049
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130192049
04090 CD molecules [BR:
pswi04090
]
130192049
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
Nectin family
130192049
CD molecules [BR:
pswi04090
]
Proteins
130192049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
V-set
C1-set
C2-set_2
C2-set_3
Ig_2
LapA_dom
DUF6476
Motif
Other DBs
NCBI-GeneID:
130192049
NCBI-ProteinID:
XP_056267868
LinkDB
All DBs
Position
3:17384362..17390355
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AA seq
466 aa
AA seq
DB search
MELKLQLSVFVLLLQVSLAVWQRVTVRTGQTLSLSCPVTDAHITQVDWKNPEGYIIFFNN
YKALKDKRYSITKLSLSEFTISISGITFKDGGIYTCSQYGAHTTEKKVEVTVLGHPKMEV
ATNEGTFVIKCTAEGNHYPPQISWKLNNGPEIIAHGQEEVRTYDDNKYVTMEMLHVRPVE
KRITVKCLVRHPALHSRPLMNFVKIGPDSTKPRGTTTTSSPTTQPRGSTVVPGTTTVFRH
RRTTVYLPTRDVKGPSSESSITLSAAPSNQLFSSFEPKIVTAPSGRPLVPVKSTGSHLST
GDDSTTSVVFGSTRRRNDTISNATSTTDWTSVSEATEDITSNNSTKGNRTGSFNDTNIRT
GTGGSSSLLVFLVTCLIFGLLVVVIFFAIKLRRAHIAWKRDNEDTVPSEESSKSKSSLED
KNAQGQRRRGLFNMAFTQYVVEKPAVISSVINTNAMAAAEINNEQT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaagctgcagctcagtgtcttcgtgttactcctacaggtttcacttgccgtg
tggcagcgtgtgactgtgagaacaggtcagacactcagcttaagctgtccagtcactgac
gctcacattacccaagtcgactggaagaatcctgaaggatatattattttcttcaacaac
tataaagctttaaaggacaagcgctacagcatcaccaaactgtctctgtcagaatttacc
atcagtatttccggcatcaccttcaaagatggaggcatctacacgtgctctcagtatggc
gctcacacaacagagaagaaagtggaggtgacagtgttagggcatcccaaaatggaagta
gcaacgaatgaaggaacgtttgtcataaaatgcactgctgagggaaaccactatcctccc
cagatctcctggaagttgaataatgggcctgaaattattgctcatggccaagaagaagtt
agaacatatgatgacaataaatatgtcacaatggaaatgctacatgttcgcccagtggag
aagaggatcactgtcaaatgccttgttcgccatccagctttgcactcacgacctttgatg
aactttgtcaaaattggaccagactcaacaaagccccggggcacaacgacgaccagttcc
ccaacaacccagcctagagggtcaacggtggtgccaggaacaacaaccgtcttcagacac
aggagaacaacagtgtaccttccaaccagagacgttaaggggccttcatcagagagctca
ataacgttatcagctgctccctccaatcagctgttttcttccttcgagccaaagatagtc
acagcacccagtggacgtcctctggtccctgtaaaatccactggctcacatctcagcacc
ggagatgactcaacaacatctgtagtattcggctcgaccaggaggaggaatgacaccata
agtaatgcaaccagcacaacagactggacgtctgtctctgaggcaacagaagacatcaca
tccaataacagtacaaagggaaaccgaacagggagttttaatgacacaaatatacggaca
ggaaccggaggaagttcatcattactggtcttcctggtcacatgcctgatattcggtcta
ctggtggttgtcattttctttgccatcaagctgagaagagcgcacattgcctggaagaga
gataatgaggacactgttccatcagaggagagcagtaaatcaaaatcaagcctcgaagac
aagaatgcccaaggacagagacgaagagggctcttcaacatggcattcacacagtacgtc
gttgaaaaaccagcggtgataagctcagtgataaacacaaatgcgatggcagcagcagag
ataaataatgagcagacataa
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