Pseudoliparis swirei (Mariana hadal snailfish): 130192166
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Entry
130192166 CDS
T09868
Name
(RefSeq) EMILIN-1-A-like isoform X1
KO
K24246
emilin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130192166
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
130192166
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMI
C1q
DUF4407
AATF-Che1
ATG17_like
DUF1690
OVT1
DUF948
Motif
Other DBs
NCBI-GeneID:
130192166
NCBI-ProteinID:
XP_056267903
LinkDB
All DBs
Position
4:complement(34715657..34731884)
Genome browser
AA seq
1456 aa
AA seq
DB search
MAPLLLLLLLALWTGARAKSAFPQRPSYSLYTSGSAHGARAASRHRNWCAFVVTKAVSCV
VEDGVETYVKPDYHPCSWGSGQCSRVVVYRTYMRPRHKAAYKMVTEMQWKCCHGYSGEDC
NGGPGTQISTTRPQPRPGGQGGAGTGYGQGGGGQGGAGMGYGQGGGQGGGTGYGQGGGQG
GGTGYGQGGGGQGGARTGYGQGGGATGYGQGGGQGGGTGYGQGGGQGGGTGYGQGGGGQG
GARTGYGQGGGATGYGQGGGQGGGTGYGQGGAGTGYGQGGGGQGGARTGYGQGGGATGYG
QGGGQGGGTGYGQGGGGTGGGGMGYGQGGGGQGGGGSSGSGHSGRGEKEKMRQLEEKIQS
LTKTLQDLQTTVNEQFQQEVNKSGVSGGGGGGGGGGGPSSGGRNPADAAQPEIKETIDSI
QTKLDQLDNRTQAHDKTLDSINNHLVNRKGNDLDGGLSGGGLSGGKLNSLKEEILRELET
RVSLSCSSCQAGVEDLRRQQQEDRESIRALEKQLNAMDLRYRQSLDGLRREVVRWQGCCA
TVNDFQDRVNDAERKISSASENVDVLQNRLDKEVSGGGGNNENGGFGGGWLGGGGGIGGR
GGDVAVTEDRLDNRLRDLERRINDTVQRTEQSCSYLENDLKDYFHRELGDLRTVFLDRFD
DQAFRIVDVELDVGLVKDGVGDHGKRLSKLQNNTSLISRRLEECNCGGSEGGGVGGVGGR
GSSDRGDGGGRWGAGRDGGESTTGGSGTERGTTGGGSTGGGSTGRGSIGGGSTGGGSTGG
GSTGRGSIGGGSTGGGSIGGGSTGRGSIGGGSTGGGSTGRGSTGGGSTGGGSTGGGSTGR
GSIGGGSTGGGSIGGGSTGRGSIGGGSTGGGSIGGGSTGGGSTGGGSIGGGSTGGGSTGG
GSTGGGAGNGLSGMGETEKSLEWRVVANEDQIRHFNTQIKDMSVSGDSLLDKVVDLSQDV
RKIKDLTGDHGEHFNRIVTEVEVLGHDCELCGKVEDELQRLKNHSHDALGRMQSHINRLQ
IRLEDQVRLLRGDVRTCTGQCNTSPDTPTGGGSGGGGGTSGRGPGLDAEKPLDGHSVIGG
SSNNQLKTLQGELSEVILTFSSINDTLKGLEHTVQKHGSVITDLGNTKDKIISELDKIQQ
EVTEHIEDSRDRLDAVDGDVRRFQSTLLVEMGDCRRSGDGLEKRLSKLEGICGRLDGVSD
SIVKIKEGLNRHVSTLWTCVSGLNESVVHHGGIMDAIQRNQDDVYRRMKSLNSSLNQVSK
DLQRSSEHDLPGPPGPLGERGLNGLPGLPGRQGDRGYPGPKGETGVHGVDALVPRLSFSA
ALSVPMERAGTILFDKVFVNEGDFYDPRTGIFTAPVDGRYFFSAVLTGHKNEKIEAVLSK
SNYGMARVDSGGYQPEGLENNPVAEAKTPPGSLAVFNIILPLQSRDTVCIDLVMGKLAHS
VEPLTLFNGMLLYEDL
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctgctgctgctgctgttgctcgcgctctggaccggcgcgcgagccaagagc
gcgttcccgcagagaccctcctacagcctgtacaccagcgggagcgcgcacggagctcgc
gccgccagcagacacaggaactggtgtgcgttcgtggtgacgaaggcggtgagctgtgtg
gtcgaggacggagtggagacctacgtgaagcctgattatcatccctgcagctgggggagc
ggacagtgcagcagggtggtggtataccggacctacatgaggccgcggcacaaagcggcc
tacaagatggtgacggagatgcagtggaagtgttgccatggctacagtggagaggactgc
aatggaggtccaggaacccagatctccaccaccagacctcagcccagaccggggggccaa
gggggagcagggacgggctatggtcagggtggaggaggtcagggtggagcagggatgggc
tatggtcagggtggaggtcaaggaggaggaacgggctatggtcagggtggaggtcaagga
ggaggaacgggctatggtcagggtggaggaggtcagggtggagcaaggacgggctatggt
cagggtggaggagcgacaggctatggtcagggtggaggtcaaggaggaggaacgggctat
ggtcagggtggaggtcaaggaggaggaacgggctatggtcagggtggaggaggtcagggt
ggagcaaggacgggctatggtcagggtggaggagcgacaggctatggtcagggtggaggt
caaggaggaggaacgggctatggtcagggtggagcagggacgggctatggtcagggtgga
ggaggtcagggtggagcaaggacgggctatggtcagggtggaggagcgacaggctatggt
cagggtggaggtcaaggaggaggaacgggctatggtcagggtggaggagggacaggtgga
ggagggatgggctatggtcagggtggaggaggtcagggtggaggaggcagttctggatct
ggacacagtggacgaggtgagaaggagaagatgaggcagctggaggagaagatccagagc
ttgaccaaaaccctccaggaccttcagaccaccgtgaacgaacaatttcaacaggaagtc
aacaaatcgggcgtcagtggaggaggaggaggtggaggaggaggaggaggtccctcttca
ggaggaaggaatcctgctgatgcagctcagccggagattaaagagacgatcgacagcatt
cagacgaaactggaccagctggacaaccgcacacaggcccatgataagaccctggacagc
atcaacaaccacctggtgaataggaaagggaatgacctggacggaggtctgtccggagga
ggactgagtggagggaagttgaattcgttgaaggaggagatcctgagggagttggagacg
agggtgtcgctgtcctgctcctcctgtcaggccggcgtggaggatctacgccgacagcag
caggaggaccgggagagcatccgagctctggagaagcagctcaacgccatggaccttcgg
tatcggcagagcctggacggactgcggcgggaggtggtgcgctggcaaggatgctgtgcc
accgtcaacgacttccaggaccgcgtcaatgacgctgagcgcaagatcagctcagcctca
gagaacgttgatgttctgcagaaccgtctggacaaggaggtcagcggaggaggcggcaac
aacgagaacggcggcttcggaggaggatggttgggtggtggcggtggaattgggggacgt
gggggcgatgtcgcggtgacggaggaccgactggacaatcgtctgagggatctggagcgg
cgtatcaacgacaccgtgcagcggaccgagcagagctgctcatacctcgagaacgacctg
aaggactacttccacagagagctgggggacctgaggacggtgttcctggaccgctttgat
gaccaggccttcaggatcgtagacgtggagctggacgtggggctggtgaaggacggggtg
ggcgaccacggcaagaggctgtcgaagctgcaaaacaacacatccctcatcagccggagg
ctggaggagtgcaattgtggagggtctgaaggaggaggggtaggaggagtaggaggaagg
ggaagtagtgaccggggagatggaggaggaaggtggggagcaggtagagatggaggagaa
tctacaacaggaggatctggaacagaaagaggaactaccggaggaggatctacaggagga
ggatctacaggtagaggatctataggaggaggatctacaggaggaggatctacaggagga
ggatctacaggtagaggatctataggaggaggatctacaggaggaggatctataggagga
ggatctacaggtagaggatctataggaggaggatctacaggaggaggatctacaggtaga
ggatctacaggaggaggatctacaggaggaggatctacaggaggaggatctacaggtaga
ggatctataggaggaggatctacaggaggaggatctataggaggaggatctacaggtaga
ggatctataggaggaggatctacaggaggaggatctataggaggaggatctacaggagga
ggatctacaggaggaggatctataggaggaggatctacaggaggaggatctacaggagga
ggatctacgggaggaggtgcaggcaacgggttatctgggatgggagaaacagagaaatcc
ctggagtggagagtggtcgccaacgaggatcagattcgacactttaacactcaaatcaaa
gacatgtcggtgtctggagactctctgctcgacaaggttgtggacctgagccaagatgtc
cgtaagatcaaggacctgaccggagatcacggcgagcactttaaccgaatcgtgacagag
gtggaggtgctggggcacgactgcgagttgtgcgggaaggtggaggacgagctgcagagg
ctgaagaatcattcccacgatgcactggggcgcatgcagagccacatcaacagactccag
atacgactggaggaccaggtccgcctgctgcgaggcgacgtcaggacctgcaccggccaa
tgtaacaccagcccggacacgcccacaggtggtggttctggtgggggcggtggaaccagc
ggacgaggacctgggttggatgctgagaagcctttagacggccacagcgtgatcggagga
tccagcaacaaccagctgaagacgctgcagggcgaactgtccgaggtcatcctcaccttc
agctccatcaacgacaccctgaaggggctggaacacacggtgcagaaacacggcagcgtc
atcaccgacctcggaaacacaaaggacaagatcatctccgagctggacaagatccagcag
gaggtgacggagcacatcgaggacagccgcgaccggctggacgccgtggacggggacgtc
cggcggttccagagcacgctgctggtggagatgggggactgccggaggtctggagacggg
ctggagaagaggttgtcgaagctggagggaatctgtgggaggctggacggcgtctccgac
tccatcgtcaagatcaaagaaggtctgaaccgacacgtgtcgacgttgtggacgtgtgtc
tccggtctgaatgagtcggtcgtccatcacggaggaatcatggacgccatccagaggaac
caggacgacgtctacagaaggatgaagagtctgaactccagtctgaaccaggtctccaaa
gacctgcaaaggtcctctgagcacgacctgccaggaccccccggaccccttggagagaga
ggcctcaacgggctgccggggcttcctgggcgacaaggggaccgaggttatcctggtccc
aaaggtgaaacaggtgtccacggcgtggacgctctggtgcccaggctctccttctctgca
gcgctcagcgtccccatggagagggcaggaaccatcctcttcgacaaggtctttgtcaat
gaaggagacttctacgacccaagaacaggtatcttcaccgctccggtcgacggacgatac
ttcttcagtgccgtcctgacgggtcacaagaacgagaagatcgaggcggttctgtccaag
tccaactacggcatggctcgggtggactccggaggctaccagcccgaaggcctggagaac
aacccggtggccgaggccaagacccctccggggtctctggccgtcttcaacatcatcctg
cccctgcagagccgggacacggtctgcatcgacctggtgatgggcaagctggcccactcc
gtggagccgctcaccctcttcaacggcatgctgctgtacgaagacctgtga
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