Pseudoliparis swirei (Mariana hadal snailfish): 130192206
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Entry
130192206 CDS
T09868
Symbol
chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130192206 (chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130192206 (chrna5)
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
130192206 (chrna5)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130192206
NCBI-ProteinID:
XP_056267965
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All DBs
Position
4:3525112..3533886
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AA seq
470 aa
AA seq
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MMPRAGGAAAALALLLLPLLCCCHLCHSLRVPQLSSFAKAEDKLFKYLFGNYQKWVRPVE
YLNQTIRVKFGLAISQLVDVDEKNQRMTTNVWMKQEWLDRKLRWNPDDYQGITTIRIPSD
RIWRPDIVLYDNSDGRFEGIATKAVVKYDGTISWTPPANYKSACTIDVTFFPFDLQNCSM
KFGSWTYDGSQVDIILEDFHVDKQDYFDNGEWEIVMATGSRGLRTDSSSTYPTITYFFII
RRLPLFYTLFLIIPCIGLSFLTILVFYLPSNCGEKIALCTSVLVSLTVFLLVIEEIIPSS
SQSIPLIGEYLVFTMIFVTLSIIITVFAINIHHRSSSTHHDMAPWVRRIFLHRLPKLLCM
RSHADRYAGDGVARIGRAAGRGTTKLSSLLYTKHNLESALDSIRYITMHVVKANELRAVV
QDWKYVAQILDRMFLWAFLLVSILGSALLFIPVIYKWASIIVPNHAGSTL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgagagccggaggggcagccgccgcgctcgcactgctgctgctgccgctgctg
tgctgctgccacctgtgccactcgctgcgggttccacaactctcctcctttgcaaaagca
gaggacaagctgttcaaatacctatttggaaactaccagaaatgggtccgcccagtggaa
tacctgaaccagacgatccgcgtgaagtttggactcgccatctcccagttagttgatgtg
gatgagaaaaaccagcgaatgacgaccaacgtgtggatgaaacaggagtggcttgaccgg
aaactcagatggaaccctgatgactatcagggcatcacgactatccgaatcccttctgac
aggatctggcgccctgacatcgtactgtatgataattcagatgggcgtttcgagggtatt
gccaccaaggcggttgttaagtacgatggaaccatatcgtggacaccgccagccaactac
aagtcagcctgcaccatcgatgtcaccttctttccttttgacctccaaaactgttcaatg
aagtttggctcctggacatacgacggctcgcaggtggacatcattttggaggacttccac
gtggacaagcaggactattttgacaacggggaatgggagatagtgatggccacaggtagc
cgtggcctgaggacggacagcagctccacctatcccaccatcacctacttcttcatcatc
cgcaggttgcctcttttctacaccctcttcctcatcatcccctgcatcggcctgtccttc
ctcaccatacttgtgttctacctgccttccaattgcggcgagaagatcgctctgtgcacc
tcggtcctggtgtccctcacagttttcctcctggtcatcgaggagatcatcccttcctcc
tcgcagtccatccctctcatcggggagtacctggtcttcaccatgatattcgtcacgctt
tccatcatcatcaccgtctttgccatcaacatccaccatcgctcctcttctacgcaccac
gacatggcaccctgggtgaggaggatcttcctgcaccgactgcccaagctgctgtgcatg
cgcagccacgccgaccgctacgccggggacggagtcgcccgaattggtcgagcagcggga
cggggcacgacgaagctctcatctctgctctacaccaaacacaacctagaatcagctttg
gattctatccgctacataaccatgcacgtggttaaagccaatgagctcagagcggtggtt
caagactggaaatatgttgcccaaatcctggatcggatgtttctttgggccttcctcctg
gtgtccatcctgggctcggctctcctcttcatccccgttatttacaaatgggccagcatc
atcgtccctaaccacgctggaagtaccctctag
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