Pseudoliparis swirei (Mariana hadal snailfish): 130192219
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Entry
130192219 CDS
T09868
Name
(RefSeq) mucin-5AC-like
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWD
Mucin2_WxxW
C8
TIL
VWF
VWC
Gmx_para_CXXCG
Motif
Other DBs
NCBI-GeneID:
130192219
NCBI-ProteinID:
XP_056267985
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Position
4:27351438..27371245
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AA seq
2245 aa
AA seq
DB search
MAMANEWLLWLTVSAVVAALHTEAKSAVNVFSSMSQTSERITGVSPIHNGQICSTWGNFH
FKTFDGDIFQLHSTCNYILTSSCRSGYKDFNIQLRRQDAGGQNTINSIIMKLEGVVVELS
EGSVIVDGELAALPFSQGGVLIEKTPTYIRIKAKLGLVAIWNEDDSFLVELDQKYKNQTC
GLCGDFNGVQLFNEFYSHGVKITPVDFANFWKMDGPTESCSDYTLESTQSCSNLKPLCEP
LLTGPAFNSCYSLLDLASFTSACVTDLCNCANGIDGPADPSCLCNTVSEFSRQCSHAGGK
PKNWRTKELCWKSCPYNMEYMECGSPCADTCSNPEASLTCDNHCIDGCFCPPGMVWDDLN
RKGCVPMSACSCSYNSKIYGPGESYSSHCKRCVCESGQWTCTEENCPGMCSVEGGAHINT
FDGKDYSFHGDCSYVLAKDCTGAQFVVQVQLVQCGLTDSETCLKSVTLGLSGGAHVITIQ
PKGKVFVNGIYAQLPFSAAGISAFKASSFYLLVQTSVGVLLEVQLQPVMQLHVTVTSEYQ
SKTCGLCGNFNSNQADDFLKLSGVPDATATGFVNSWKTHAACPDVKSNFEKPCSLSVDNE
KYAQHWCSMLSDPEGVFASCHSEISPDSHKENCIYDSCNCENSEDCMCAAVSSYVHACAA
AGIQMSGWRETICGKYASSCPRSMVYSYNITASSHTCRCISSSDLSCHFSFPPIDGCVCA
EGTYLDDAGKCVQSHECPCYDEGSVVPAGQVVNRDGVMCTCKEGKLSCIGKLFAQPLSCA
PPMVFFNCSANGPAAKGTECEKSCNMLDPSCVTTACVSGCMCPSGMVLDGEGGCIQPEAC
PCVHNGVSYQPGQTTNVDCNTCTCKDMKWECTTKQCDGTCSVYGAGHYMTFDQKRYTFDG
SCESILTQDYCGNATSNGTFRVLTETVPCGTTGTTCTKNIKIFIGDAELILTDGSYQLVL
GGNEETVPFQYSTMGIYLVIEANNGLIFIWDRKTSLFIKLSPKYKGRVCGLCGNYDDIAN
NDFTTRSHAVVVNPLVFGNSWKNLPSCPDAHSIINPCTANPHRQAWSQKQCSMIQSDVFT
ACHSIVDPAPFYDACVFDSCACDTGGDCECFCTAVAAYSESCNQAGICIPWRTPKICPLF
CDYYNHPGECEWHYKPCGSPCMKTCRSPSGRCSTEIPPLEGCYPKCPTAQAYFDEDKMTC
VSREQCGCYDTEGRHYNNNEEVPTTENCQTCTCSTTIQCHYDAQACTCTYHGNKYPPGNT
IYNTTDGHGNCITAVCGNNGTLDKRSYPCPETTPTTHMPSTTTTAASPSSSTFVFTSTTP
EQSTTPQISTIIFTTEHFTVTPCQENVCTFSQWISGDYPTYGFGGGDNETIKFIIQKGYK
ICPKPVEVECRAKNYPDTPLNDLGQKVTCNMEGLLCRNILQYPPICLNYEIRVKCCQTMQ
CSTTPKPTVTSSTIQTKIPSTKTNTPFITSEKTTTQTQTTTTTKTSPTTSTTIKTHTTTQ
QPTTTPSTLSTTVPTTTPSTTPTSTTSTTTVPTTTASTPSTPKTHSTTVPTTTHSTTPTT
TTPTPSTTVPTTSASTTPTTTTPTPSTTVPTTTLSTTPTTTTSTTFETPTPTPFTTPHCP
EGNNMTCGWSGWINLGKPTPGPDGGDNESIQKIISSGHLVCSYLEDVECRAASYPDMSMS
LVGQTVTCNKEVGFKCINKEQGLQQECFDYEIQLKCCGCPGPSTASTPSTTVPTTTASTP
STPKTHSTTVPTTTASTLSTPKTHSTTVPTTTHSTTPTTTTPTPSTTVLTTTPSTMPTTT
TSTTTVPTTTASTLSTPKTHSTTVPTTTHSTTPTTTTPTPSTTVPTTSASTTPTTTTPTP
STTVPTTTPSTTPTTTTSTTFETPTPTPFTTPHCPEGNNMTCGWSGWINLGKPTPGPDGG
DNESIQKIISSGHLVCSYLEDVECRAASYPDMPLSLVGQTVTCNKEVGFKCINKEQGLQQ
ECFDYEIQLKCCGCPGPSTASTPSTTVPTTTASTLSTPKTHSTTVPTTTHSTTPTTTTPT
PSTTVPTTTPSTTPTTTTSTTTVPSTTASTLSTPKTHSTTVPTTSHSTTPTTTTPTPSTT
VPTTSASTTPTTTTPTPSTTVPTTTPSTTPTTTTSTTFETPTPTPLTTPHCPEGNNMTCG
WSGWINLGQPTPGPDGGDNESIQKIISSGHLVCSYLEDVECRAASYPDMSMSLVGQTVTC
NKEVGFKCINKEQGLQQECFDYEIN
NT seq
6738 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggctaacgagtggcttctatggctgaccgtgtctgctgtcgtggcggctttg
cacaccgaggcaaagtcggctgtgaacgtcttctcctccatgtcccagacttctgaaaga
ataacaggcgttagtcccatccacaatggccagatttgcagtacgtggggcaatttccac
ttcaagacctttgatggagatattttccaattgcactccacttgcaactacatcctgacc
tcttcatgccggagcggttacaaggacttcaacatccagttaagaagacaggatgctggt
ggccaaaacaccatcaacagcatcattatgaagctggagggtgtagtggtggagctctct
gagggctctgtgatcgttgatggagaattagccgccctaccattcagtcaaggaggagtg
ctcatcgagaaaactcccacctacatcagaatcaaagcaaaactgggattagttgctatc
tggaatgaggatgactcttttctggtggaactagaccagaagtacaagaaccaaacatgt
ggtctttgtggggactttaatggggtccagctcttcaatgaattctacagtcatggtgtg
aaaataaccccagtggattttgctaacttctggaaaatggatggtccaactgaaagctgc
tctgactacacactggaatcgactcaaagctgcagcaacttgaaacctctgtgcgagccg
ctcctcacagggccggccttcaacagctgttacagtctgctcgacctcgcctccttcact
tctgcctgtgttacggacctctgcaactgcgccaatggcatcgatggacccgctgaccca
tcctgcctgtgcaacactgtgtcagagttctccagacagtgtagccatgccggtggaaag
cctaaaaactggagaaccaaggagctgtgctggaagtcatgtccctacaacatggagtac
atggagtgtggcagcccttgtgccgacacctgctccaaccccgaggccagcctcacctgt
gacaaccactgtatcgatggatgcttctgccccccaggcatggtttgggatgatttaaat
agaaagggttgtgtcccaatgagcgcgtgctcctgcagctacaacagcaagatctatgga
cctggggagtcctactccagtcactgcaaaagatgtgtgtgtgagagtggacagtggacg
tgtacggaggagaactgtccaggaatgtgctctgtggagggcggggctcacatcaacacc
ttcgatggaaaagactacagcttccatggggactgctcctacgtcctggctaaggactgc
actggagcccagtttgtggtccaggtacaactggtgcagtgtggactgactgacagtgaa
acctgcctcaagtctgtgaccttgggtctgtctggaggggctcatgtgatcaccatccag
cccaaagggaaggtttttgtgaatgggatctacgctcagttacctttctctgctgctggg
atctccgccttcaaagcgtcctccttctacctgctggtgcagacgtctgtcggtgttctg
ttggaagtgcagctccagccagtcatgcagctccacgtcacagtgaccagtgaataccag
tccaagacctgtggtctgtgtgggaacttcaacagcaaccaagctgatgacttcctgaag
ctcagtggagttccagatgccacagcaaccggtttcgtcaacagctggaagacacatgct
gcttgccccgatgtgaagagcaactttgagaagccctgcagtcttagtgtggacaacgag
aaatacgcccagcactggtgctccatgctgagtgaccccgaaggagtgtttgcctcctgt
cactcagagatcagccctgactcgcacaaagagaactgcatatatgactcctgtaactgt
gagaacagcgaggactgcatgtgtgctgcggtctcctcctatgtccatgcctgtgcagct
gcaggaatccagatgagcggctggagggagaccatctgtgggaaatatgccagctcctgc
ccccgcagcatggtctactcctacaacatcacggccagcagccacacctgccgctgcatc
agcagctccgacctcagctgtcacttctccttcccgcccatcgatggctgtgtctgtgca
gagggaacctatctggacgacgctgggaagtgtgtccaatctcacgagtgtccctgttat
gacgaaggctccgtggtgcccgccggacaggtggtcaacagggacggggtcatgtgcacc
tgtaaggagggcaaactgagctgcattgggaagttatttgcacaaccattgtcctgtgct
cctcccatggtgttcttcaactgctctgctaatggtccggctgcaaagggaactgagtgt
gagaagagctgcaacatgttagatccgtcctgtgtgaccacggcgtgcgtgtccggctgt
atgtgtccatctgggatggtgcttgacggtgaaggcggctgcattcagccagaggcctgt
ccctgtgttcacaacggtgtctcttaccagcctggacaaaccaccaatgtggactgcaac
acctgcacttgtaaagacatgaagtgggagtgcacgaccaaacagtgtgatggaacctgc
tcggtctatggcgctggacactacatgacttttgatcagaagcgctacacctttgatggc
agttgtgaaagcattctcactcaggactactgtggcaatgctacgagtaatggaaccttc
agagtgctcactgagactgttccatgtggaacaacaggaaccacctgcaccaagaacatc
aagatctttattggggatgcagaactaattctaacagatggaagctaccagttggttttg
gggggaaatgaagaaacagttccatttcagtacagcactatgggcatctacctggtaatt
gaagccaacaatggactaattttcatatgggacaggaagaccagtttgttcatcaagctc
agcccaaaatataagggtcgtgtatgtggactgtgtggcaactatgacgacattgcaaat
aatgacttcacgacaagatcccatgcagtggttgtcaacccactggtgttcggtaacagc
tggaagaatttgccaagctgccccgacgctcacagcatcatcaacccctgtacagccaac
ccacacagacaggcctggtcccagaaacagtgcagcatgatacagagtgacgtcttcaca
gcctgccactccattgtggatccggctccattctatgatgcatgtgtgtttgactcatgt
gcttgtgacacgggtggagactgcgagtgtttctgcactgctgtggctgcttattctgaa
tcctgtaatcaagctggcatctgtataccatggagaaccccaaagatctgtcctcttttc
tgtgactactacaatcaccctggtgaatgtgaatggcactacaagccatgtggatctcct
tgtatgaaaacctgcaggagcccgtcaggaagatgttctacagaaatacctccactagaa
ggttgctatccaaaatgtcctactgcacaagcatactttgatgaggacaaaatgacatgt
gtttcgagagaacaatgcggctgctacgatacagaggggagacactataataataatgaa
gaggtgccaacaactgaaaactgtcaaacatgtacatgttcaacgaccatccaatgccat
tatgatgctcaagcctgcacttgcacatatcatggaaacaagtatccccctggcaatacg
atctataacacaacagatggacatgggaactgcatcacagcagtatgtgggaataatggc
accttggataagagatcatatccatgcccagaaactactccgacaacccatatgcccagt
acaaccacaacagcagccagcccgtcttcaagcacctttgttttcacatcaaccacacca
gagcaatctacaacacctcaaatttcaacaataatttttacgactgaacattttacagta
acaccttgtcaggaaaatgtatgcaccttttcacagtggataagtggcgactacccaacc
tatggttttggaggtggggacaatgaaaccatcaaattcatcatccagaaaggatataaa
atatgtccaaaaccagtggaagtagaatgcagggctaaaaactatcccgatacaccatta
aatgacttgggacaaaaagtaacatgtaatatggaaggacttctgtgtaggaacatttta
cagtatcccccgatatgtttaaattatgaaattagggtgaagtgttgccagacgatgcag
tgcagcacaacaccaaaacctactgttacttcctcaacaatacaaactaaaataccttct
acgaagaccaacacaccctttatcacatcagaaaaaacaacaactcaaacacaaacaact
acaacgactaaaacctctcccacaacttcgaccacaattaaaacacatactacaactcaa
caaccgacaacgacaccatcaactctttccacaacagttccaactacaacaccttcaact
acgccaacctccacaacttcaaccacaacagttccaactacaaccgcttcaactccgtca
acccccaaaactcattcaacaacagttccaactacaacacattcaactacaccaaccacc
acaactccaactccttccacaacagttccaactacaagcgcttcaactacgccaaccacc
acaactccaactccttccacaaccgttccaactacaacactttcaactacgccaaccacc
acaacttcgaccacatttgagacaccaactccgacacccttcactacacctcattgccct
gagggaaacaatatgacatgtggttggtcaggatggattaatcttggcaagcccacacca
ggccctgatggtggggataatgaatcaatccagaagataatctcatctggtcatcttgta
tgctcttatcttgaagacgttgagtgtcgagctgcttcttacccagacatgtccatgtca
ctggtgggtcaaactgtgacttgcaataaagaggttggtttcaaatgcatcaacaaagaa
caagggcttcagcaagagtgttttgattatgaaatccaattaaaatgctgtgggtgtcca
ggtccatcaactgcttcaactccttccacaacagttccaaccacaaccgcttcaactccg
tcaacccccaaaactcattcaacaacagttccaactacaacagcttcaactctgtcaacc
cccaaaactcattcaacaacagttccaactacaacacattcaactacgccaaccaccaca
actccaactccttccacaaccgttctaactacaacaccttcaactatgccaaccaccaca
acttcaaccacaacagttccaactacaaccgcttcaactctgtcaacccctaaaactcat
tcaacaacagttccaactacaacacattcaactacaccaaccaccacaactccaactcct
tccacaacagttccaactacaagcgcttcaactacgccaaccaccacaactccaactcct
tccacaaccgttccaactacaacaccttcaactacgccaaccaccacaacttcgaccaca
tttgagacaccaactccgacacccttcactacacctcattgccctgagggaaacaatatg
acatgtggttggtcaggatggattaatcttggcaagcccacaccaggccctgatggtggg
gataatgaatcaatccagaagataatctcatctggtcatcttgtatgctcttatcttgag
gacgttgagtgtcgagctgcttcttacccagacatgcccctgtcactggtgggtcaaact
gtgacttgcaataaagaggttggtttcaaatgcatcaacaaagaacaagggcttcagcaa
gagtgttttgattatgaaatccaattaaaatgctgtgggtgtccaggtccatcaactgct
tcaactccttccacaacagttccaactacaaccgcttcaactctgtcaacccccaaaact
cattcaacaacagttccaactacaacacattcaactacgccaaccaccacaactccaact
ccttccacaaccgttccaactacaacaccttcaactacgccaaccaccacaacttcaacc
acaacagttccaagtacaaccgcttcaactctgtcaacccctaaaactcattcaacaaca
gttccaactacatcacattcaactacaccaaccaccacaactccaactccttccacaaca
gttccaactacaagcgcttcaactacgccaaccaccacaactccaactccttccacaacc
gttccaactacaacaccttcaactacgccaaccaccacaacttcgaccacatttgagaca
ccaactccgacacccttaactacacctcattgccctgagggaaacaatatgacatgtggt
tggtcaggatggattaatcttggccagcccacaccaggccctgatggtggggataatgaa
tcaatccagaagataatctcatctggtcatcttgtatgctcttatcttgaagacgttgag
tgtcgagctgcttcttacccagacatgtccatgtcactggtgggtcaaactgtgacttgc
aataaagaggttggtttcaaatgcatcaacaaagaacaagggcttcagcaagagtgtttt
gattatgaaatcaattaa
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integrated database retrieval system
