Pseudoliparis swirei (Mariana hadal snailfish): 130192323
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Entry
130192323 CDS
T09868
Symbol
sync
Name
(RefSeq) uncharacterized protein sync isoform X1
KO
K10377
syncoilin 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130192323 (sync)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
130192323 (sync)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6988
Motif
Other DBs
NCBI-GeneID:
130192323
NCBI-ProteinID:
XP_056268175
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Position
1:17211064..17219061
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AA seq
723 aa
AA seq
DB search
MKCRNEKSDHIRVLLSRVDETAVKRRGSYDESSSNPMEGGTISPGFGPPFIQEEGVAAAE
RILSEQRERGAAARSGLAFEGPPPDPLASMEPYLQEMDELLNGCEELVGRPFGSRFSASR
GETRADASEGCGETSASLRGRLYASYADGPGRGVTSAAMPLTSAGNRLSETMVEYEGQLL
GMLAMLESSMGGESGMDFEPQGREYAHVRENPRLRRGTTQGSATTSETRATHPGSWGGPG
AGGGGASGETGSEATPGDLPMNGGRQTRGLLGGDVDGFSGVLDPRSGFSGPSTPFDCAGD
DPMCCEATEAGSGRATAREGDASGIEVDDGGGEELKMDTADLESGANDLGALGCQMEACI
EEVQRLERRRKELLTEVLELRGAKDRGEAVEEEEEEPIDGKVVKLMNAFKREEEGRRAER
TREIQSLREERAEEERTLWKVSLERQELHGELRTLRRRLFAAARDCAHNQAALNTQRREV
EQLRGEEEKLQALVLQLTEEGSRLRAARQRQLSDLQAALQAQTCGQTSNAQDQLSECRRH
SYGDVQQYLQAGLKALEDRYEPILLTLIKRREATAAALLKAREHARDLRAQLRPLKEEIQ
QLTLQRACLDDRLKLIAFQWREDVGQCKVSETWKEKAAERRRSGPVAERRAHAAPSSQET
VSFLEDSGRVLQTELRIQKRNTREMEELRDGLNKQLLLYRAAIEEHNKSDDDEEEEEDTI
ECS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgcagaaatgaaaagtctgatcatatccgtgtgcttttgtccagggtggatgag
acggcggtgaagaggagaggctcctacgacgagagttcgtcgaatccgatggagggcgga
accatttcacctgggttcggtcctcctttcatccaagaagagggcgtcgccgcggcggag
aggatcctctcggaacaaagagagcgcggcgccgcggcccgatccggactcgccttcgag
ggcccgccgcccgacccgctggcttcgatggagccgtacttgcaggagatggacgagctg
ctgaacggctgcgaggagctcgtcgggcgtccgttcggctcgcgcttctccgcgagtcgc
ggcgaaactcgggcggacgcgtcggagggctgcggagaaacgagcgcttctcttcggggg
cgtctttacgcgagctacgcggacgggccggggcgcggcgtgacctcggcggcgatgcct
ctcacgtcggcggggaaccgactgagtgaaaccatggtggagtacgagggtcagctcctg
ggcatgctggccatgctggagagctccatggggggggagtccgggatggactttgagccc
caaggccgggagtacgcgcacgtccgtgagaatcctcgccttcgcagggggaccacgcaa
gggagcgcgacgacgtcggagacccgggcgacgcacccggggtcgtggggcggtccgggt
gcggggggaggcggagcctccggggagacgggaagcgaggcgacaccgggggatttgccg
atgaatggaggccggcagactcgcgggcttctcggtggcgacgtggatggattctcaggg
gttcttgatcctcggtcggggttctcagggccatcgacgccattcgattgcgcgggagac
gatccgatgtgctgcgaggcgacagaggcgggatcggggcgcgcgaccgctcgcgaagga
gacgcgtccgggatcgaagtggacgacggcggcggcgaagagctcaagatggacaccgcc
gatttggaatctggcgcgaacgatttaggcgccctggggtgtcagatggaggcgtgcata
gaggaggtgcagcggttagagaggaggaggaaggagctgctgacggaggtgctggagttg
agaggggctaaagacagaggggaggccgtggaagaggaggaggaggagccgattgacggc
aaagtggtcaagctgatgaacgcattcaagagggaggaagaggggaggagagcggagagg
acgagagagatccagagcttgagggaggagagagcggaggaggagaggacgctgtggaag
gtgagcctggagaggcaggagcttcacggggagctgaggaccctgaggaggaggctgttc
gccgcggcgagggactgcgctcacaaccaggccgccctgaacacgcagcgccgcgaggtg
gagcagctgcggggggaggaggagaagctgcaggcgctggtgctgcagctgacggaggag
ggctcgcggctgcgggcggctcggcagcggcagctctcggacctccaggcggcgcttcag
gcccagacctgcggtcagacctccaacgcccaggaccagctgagcgagtgcaggaggcac
tcgtacggagacgtccagcagtatctgcaggcggggctcaaagcgctagaggacaggtat
gaacccatcttgctcacgttgatcaagaggagggaggcgacggccgcagcgctgctgaag
gccagggagcacgcccgggatctgagggcccagctgaggcccctgaaggaggagatccag
cagctgaccctccagagggcgtgtctggacgacagactcaaactcatcgccttccaatgg
agagaggatgtggggcagtgcaaggtgagcgagacgtggaaagagaaggcggccgagcga
cggcggtcgggtccggtggcggagcgccgggctcacgctgctccgtcctcgcaggagacc
gtgtccttcctggaggacagcggcagagtgctgcagacggagctgcggatccagaagagg
aacaccagagagatggaggagctgcgagacggcctgaacaaacagctgctcctctaccgg
gcagccatcgaggagcacaacaagtctgacgacgacgaggaggaagaggaggacacgatt
gaatgctcttga
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