Pseudoliparis swirei (Mariana hadal snailfish): 130192372
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Entry
130192372 CDS
T09868
Symbol
mindy2
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X1
KO
K01309
ubiquitin carboxyl-terminal hydrolase MINDY-1/2 [EC:
3.4.19.12
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130192372 (mindy2)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130192372 (mindy2)
Ubiquitin system [BR:
pswi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
130192372 (mindy2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY_DUB
Phage_ABA_S
Sporozoite_P67
Motif
Other DBs
NCBI-GeneID:
130192372
NCBI-ProteinID:
XP_056268287
LinkDB
All DBs
Position
4:11254155..11270428
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AA seq
672 aa
AA seq
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MEKNANLHRDTDGSLCATIAGAMGDVTAVGGGKGTAEKCKTSEAPLSTLVNVSCINSTTH
VCAPSCVNVIPSAGKSGVSEVLEVLPVREDKSSDTKTSGSGSGDQISNGMGHDSVLAAED
SEGGVSKLVNNKPDSPHAPLAKEGARAHAEVLAREESEPTKLVKPTQLCPDKAITAQVKP
ALPGHHTLSEGLPSGCDPDPSLGGESRSIDSLESFSNLNSCPSSDLNSEGLEDRGLALAL
QGEHGADGTKTSCPKDRAAGQSIYHIKWIKSREENTPIITQNENGPCPLLAIMNVLLLAL
KVKMPPTMEIITVEQLMEYLGDYILETKPKELSEAQRLNYEQNMSDAMAVLHKLQTGLDV
NVKFTGVRVFEYTPECIVFDLLDIPLYHGWLVDPQMHDIVKAVGNCSYNQLVEKIISCKQ
SDNSELAGEGIMAEQFLSSTATQLTYHGLCELTSTVQEGELCVFFRNNHFSTMIKYKGQL
YHLVTDQGFLTEEKVVWESLHNVDGDGNFCDSEFRLRPPSNPETVYRGQQDQIDQDYLMA
LSLQQEQQSQDVQWEQPPEGSSDLQLAKKLQEEEDRRASQYYQEQEQEQQAAAAAAAQQG
HQEPAEGDEADTGGAGANADGAGSAGAGGAGAAAGTGTAAAAGATPSPGKQSSSGERKAK
KESKDKDKCVVL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaatgcaaacctgcatcgagacacggacggctctttgtgtgccacgattgcg
ggagcgatgggcgacgttacggctgtcggcggagggaaaggaacagccgagaaatgcaag
actagtgaggctcctctcagtactttggtgaacgttagttgcattaacagcaccacacat
gtttgtgctcctagctgtgtgaatgtcattcccagtgctgggaagtctggcgtttcggaa
gtgctcgaagtcctgccagtccgggaagataagagcagcgacaccaagacgagcgggtcg
gggtccggggatcagatcagtaacgggatggggcatgactcggtgctggctgcagaagat
agcgagggtggtgtctcgaagttagtcaacaacaaacccgatagcccgcacgcacctctc
gccaaggaaggcgcacgtgcacatgctgaggtgctggctcgtgaagaaagtgaaccgaca
aaacttgtcaaaccgactcagctgtgtccggacaaagcaatcacagcacaggtcaagcct
gcgctgcccggccatcacaccttgtcggagggattgccgagtgggtgtgaccccgatccc
agccttggcggagagtcccgaagcatagattcactcgagtccttctcgaacctcaactcc
tgccccagctccgacctgaacagcgaggggctggaggacagaggactggccctggccctg
cagggcgagcacggggctgatggcaccaagacgtcgtgcccaaaggaccgagccgccggc
cagtccatataccacatcaagtggatcaagtcgagggaggagaatacgccgatcatcacc
caaaacgagaacggcccctgtccattactggcaatcatgaatgtccttctgctggcattg
aaggttaagatgccgccgacgatggaaattataactgttgagcaactgatggagtatctt
ggagactacattcttgaaaccaagcctaaagagttatcggaggctcagcggctaaactat
gagcagaacatgagtgatgccatggcagtgttgcacaagctgcagacgggtctggatgtg
aacgtgaagttcacaggggtgcgagtcttcgagtacaccccagaatgcattgtgtttgat
ctgctcgacatccctctctaccacggctggctggttgacccgcagatgcatgacatcgtc
aaggcagtgggcaactgcagctacaaccagctggtggagaagataatatcctgcaagcag
tcagacaacagtgagctggcaggggaaggcatcatggcggagcagttcctgagcagcaca
gccactcagctcacgtaccacggcttatgtgagctcacatccaccgtacaggagggagag
ctgtgtgtcttcttcaggaacaaccacttcagcaccatgatcaaatacaagggccagcta
taccacctggttacagaccaaggtttccttacggaggagaaggtcgtctgggaaagtctg
cacaatgtcgacggagacggcaacttttgtgattcggagttccggttgcggcctccatcc
aatccggagaccgtgtaccgcggccagcaggatcagatagaccaggactatctgatggcg
ctgtcactgcagcaggagcagcaaagccaggatgtgcagtgggagcagccccccgagggc
agcagtgacctacagctggcaaaaaaactccaggaagaggaggaccgacgagcctcccag
tactaccaggagcaggagcaggagcagcaggcggcggcagcagcagcagcacagcagggc
catcaggagcctgccgagggagacgaagcggacacaggcggtgcaggtgcaaatgcagac
ggtgcaggcagtgcaggagcaggcggtgcaggagccgcagctggcaccgggacggcagca
gctgctggagccacacccagcccgggaaaacagtcctcaagtggggaacgcaaagccaag
aaagaatcgaaggataaggacaaatgtgttgttttgtaa
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