Pseudoliparis swirei (Mariana hadal snailfish): 130192409
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Entry
130192409 CDS
T09868
Symbol
nedd4a
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04120
Ubiquitin mediated proteolysis
pswi04144
Endocytosis
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130192409 (nedd4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130192409 (nedd4a)
09144 Cellular community - eukaryotes
04530 Tight junction
130192409 (nedd4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130192409 (nedd4a)
04121 Ubiquitin system [BR:
pswi04121
]
130192409 (nedd4a)
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130192409 (nedd4a)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130192409 (nedd4a)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
130192409 (nedd4a)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
HECT type E3
130192409 (nedd4a)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
130192409 (nedd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
130192409
NCBI-ProteinID:
XP_056268363
LinkDB
All DBs
Position
4:complement(10904894..10928595)
Genome browser
AA seq
1259 aa
AA seq
DB search
MARRLRLQFASRRSNTDPLSESLSSHGEESGVGASARSAAESPAHGSVHFKVTPLSPDYA
NPQRHSSVFIPRVNTGGFNKKSTLQILLQPRGKLSGERDGSIEDGDPGARGGGGGGGGGA
GGGSGGGSCSSGMASDAGYCSSNSIFEPEASEKHRTTQERSRLRCKSKVPLRRCYSLVIF
QKSPCNSPPASPVCPMALSALPPVRGSHQSSPQTVNCKESTTTAVSGQRLPKGSCSAELR
DIKHVVQFKIPFQEEPTCKMEDRSKIRETSLSSDRSNRHSSSVLLHFAHQRPIVSGKGAA
TSANVDNPEAPHHPDGGHNPRRTLYRSTSACLLSSTKPTEKKVCSSGKGQEGPEENNCPR
VIQRSFSLEVPYASTGISCHVSNPKLSSPHTPHVHIHLSPCCPAKLPSSFTDVNTRHEGI
NMQKSPVENTKTRDDFLGQVDVPLNQIPTENPNTERPYTFKDFLLHPRSHKSRVKGHLRL
KMTYLPKNPGSEEETAEQAENIDPGWEFLESQDMSGPRQSQLLPALPSGWEEREDNLGRT
FFVNHESRSTQWTRPTTQEGDVTVQRRPNSNMDAEQAFNTRRRQISDPDENPARESPESW
EIITEDESTMFHSNNPLASPPPHGPAEFQLFHDELRNSTHFSGATAVEPRASHTHHATNS
SHSSRRGSAPTSTGEEHPVNPVHIPTAAVLPSGWEEKRDSKGRRYFVNHNSRSTSWSRPL
IQKTTEAPAVVAPAVAATAPPAAAAAQSGAGVPQSQAPPMSPGDSPSQHPPSTEATHDSG
SLPAGWEVRSAPSGRPFFINHNTKTTTWEDPRHPKIPVLMRKRPSLDPSDLGPLPPGWEE
RIHSDGRIFYIDHNTKNTQWDDPRLQNSAITGPAVPYSRDYKQKYDYFRKKLKKPVDIPN
RFELKLKRNAVLEDSYRRILSVKRADLLKARLWVEFEGEKGLDYGGVAREWFFLMSKEMF
NPYYGLFEYSATDNYTLQINANSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFY
KMMLQKPINLQDMESVDNEYFNSLKWILENDPTDLDLRFAIDEELFGQTHQHELKPGGSE
IVITNDTKKEYIHLVMQWRFVNRIQKQMTAFKEGFFELIPQDVIKIFDENELELLMCGLG
DVDVNDWRENTKYKNSYCSNHAVIQWFWKTVLLMDAEKRIRLLQFVTGTSRVPMNGFAEL
YGSNGPQLFTIEQWGTREKLPRAHTCFNRLDLPPYESFEELREKLHIAIENAQGFDGVD
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcggctgcgcttacaatttgcgtcgaggagaagcaacacggaccctctgtca
gaaagcctcagcagccacggcgaggagagtggagtcggtgcgtcagctcggagcgccgca
gagagtccggcgcacggctctgtccactttaaggtgacgccgctgtccccagactatgct
aatccacagcggcactcttcagtattcatacccagggttaacactggaggatttaataag
aagagcactctacagatcttgctgcagcctcgtggaaagcttagtggagagcgagatggc
agtatagaggatggagacccaggggccagaggaggaggaggaggaggaggaggaggagcg
ggcggtggctctggcggaggctcgtgcagcagcggcatggccagcgatgccgggtactgt
agcagcaacagcatctttgagccagaggcgtcagaaaagcacaggaccacccaggagagg
agtcgactccgctgcaagtcaaaggtcccgttgagacggtgctactccttggttatattt
cagaagagcccctgcaacagcccgcctgcttctccagtctgcccaatggctctgtctgct
ctcccacccgtgaggggctctcatcagtcatcgccacagacagtaaattgcaaagagtcc
actaccacagcggtaagcggccagcgtctccctaaaggaagctgttccgccgagttaagg
gacatcaagcacgtggtgcaatttaaaattcctttccaggaagagccaacatgcaaaatg
gaggacaggagtaaaatcagggaaacgtcgttatcttcagaccgatcgaatcggcactcc
agcagcgtgctgctgcactttgcccaccagagaccaatagtgtccggcaagggagctgca
acctcggctaatgtggataatcctgaggctcctcaccaccccgatggtggacacaaccct
cggagaacactgtaccgcagtacttctgcctgtttgctctcctcgacgaaaccaacagag
aaaaaggtctgttcatcagggaaaggacaggaagggcctgaggaaaacaattgtccccga
gtcatacaaaggagcttttccctggaggtgccatacgccagcactggaatttcatgtcac
gtttcaaatcccaaactcagtagtcctcacactccacatgtgcacattcatttgtctcct
tgctgcccagctaagttgcccagctcttttactgatgtcaacacaaggcacgaagggatt
aacatgcaaaagagtccggttgaaaacaccaagacacgggatgactttctgggacaggtg
gacgttcccttaaaccagataccgacagaaaatcctaatacagaaaggccatacacattc
aaggattttctgcttcacccacgaagccacaagtccagagtcaaaggtcacctgcgtctc
aaaatgacatatctgccaaaaaacccaggctcagaagaggaaacggcagaacaggctgag
aacatcgaccctggctgggagtttctggagtctcaggacatgtcgggtcccagacagagc
cagctgctgcctgctctgccctctggctgggaggagcgggaggacaacctgggaagaacc
ttctttgtcaatcatgagagcagaagcacacagtggacacgacccacaacccaggaaggt
gatgtgaccgtgcaaagaaggccgaacagtaatatggatgcggagcaagctttcaataca
cgcagaagacagatctcagacccagatgagaaccctgcacgagagtctcctgagagctgg
gagatcatcacggaggacgagtccaccatgttccacagcaataacccgctcgcatcgccc
ccaccacacgggcctgcagagttccagctgttccacgacgagctcagaaacagcactcac
ttttctggggccacagctgtcgagccgcgcgcctcccacacgcatcatgcaactaactca
agtcattccagtcgcagaggaagtgccccaacttcaacgggagaagaacatcctgttaac
cctgtgcatattccaaccgcagccgtgctgccttcaggatgggaggagaagcgagacagt
aaaggaagacgctactttgtcaaccacaacagtcgaagcacttcatggtcacgccccctc
attcagaaaaccacagaagcaccagcagtagtggcaccagcggtagcagcaacagcacca
ccagcagcagcagcagcacagagtggtgcaggtgtaccccagagccaggctccacccatg
tcccccggggactctccctcgcagcaccccccaagcacagaggccacacatgactctggc
tccctgccggctggttgggaggttcgcagcgctcccagtggaagacccttcttcattaac
cacaacacgaagactactacctgggaggatcccagacatcccaaaattcctgtgctaatg
aggaagagaccctcactcgacccatctgatctcggccctctgccgcctggctgggaagag
aggatccacagtgatgggaggatattctacatcgaccacaacaccaagaacacacaatgg
gatgatcccagactgcagaactcagcgataaccggaccagcagtgccttattccagagat
tataaacagaagtatgattacttccggaagaagctgaagaagccggtggacatcccgaac
cgctttgagttgaagctgaagcggaatgcggtgctggaggactcgtaccgacgcatcctg
tcagtgaagagggccgacctgctgaaggcaagactgtgggtggagtttgaaggagaaaaa
ggactggactatggcggtgtggccagggagtggttcttcctcatgtccaaggagatgttc
aacccgtactacggactgtttgagtattctgccacagacaactacacactgcagattaac
gccaactcaggtttatgtaacgaggaccacctgtcatactttaagttcatcggtcgggtg
gcgggcatggccgtgtatcatggcaaactgctggatgccttcttcattcggcctttctac
aagatgatgctgcagaagccgatcaatctccaggacatggagtccgttgacaatgaatat
ttcaactccttgaagtggattttggagaacgacccgacggacttggatttgaggtttgcc
atcgacgaagagctgtttggacagacccaccagcatgaactgaagccgggcggctcagag
atcgtcatcactaacgacaccaagaaggaatacatccatctggtgatgcagtggaggttt
gtgaacaggatacagaagcagatgaccgccttcaaagagggattctttgagttgatacca
caagatgtgatcaagatctttgatgagaacgagctcgagctgctcatgtgtggtcttgga
gatgtcgatgtgaacgactggagagagaacaccaagtacaagaacagctactgctccaac
cacgctgttatccagtggttttggaaaacggtgctgttgatggatgcagaaaaaagaatc
cggctcttgcagtttgtgacgggaacttccagggtcccgatgaatggctttgctgaactc
tacgggtctaacggaccacagctgttcaccatcgagcagtggggaacgcgtgagaaactc
cctcgagcccacacatgcttcaatcgactggacctgcctccttacgagtcctttgaggag
ctgagggagaaacttcacatcgccatcgagaatgcacaaggcttcgacggggtggattag
DBGET
integrated database retrieval system
