Pseudoliparis swirei (Mariana hadal snailfish): 130192413
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Entry
130192413 CDS
T09868
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pswi00535
]
130192413 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pswi00537
]
130192413 (gpc6a)
Proteoglycans [BR:
pswi00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
130192413 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pswi00537
]
Others
130192413 (gpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Serglycin
Put_Phosphatase
SpoIVA_C
Motif
Other DBs
NCBI-GeneID:
130192413
NCBI-ProteinID:
XP_056268367
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Position
4:15578080..15737925
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AA seq
570 aa
AA seq
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MYAMWRLQVSFCTLSLLLSLSSAAESKARSCSDARQAYNAKGFSLVNVPHQEISGEHLRV
CSQGYTCCTSEMEDELNQQSKVEFENLVEESSRTMRTTFVSRHKKFDEFFLELLDNSEKS
LHGIFKMTYGKLYMKNSQVFQDLFAELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQ
YQFTDDYLECVSKYTDQLKPFGDVPRKLKAQVTSAFIAARTFVQGLMVGREVANRVAKVN
VIPACVKALTKMLYCPYCRSMPGLKPCHNYCHNVMRGCLANQADLDAEWNLFIDAMLLVA
DRLKGPFNIESVLEPIDVKISNAIMNMQDNSMQVSAKVFQGCGQPKPSGIGRSARGISDV
FSARFRPFTREEMPTAAAGTSLDRLRVVWRTMQHSMIDIKEKLNESKRFWSNLPDDICAK
GNLTESDEDQCWNSHTKGRYFPEVVKEGLTNQVNNPEVDVDITRPDTLIRQQIMALRVMT
NKLKNAYNGNDIYFQDSSEEGSTSGSGSGCSEGCTTEFVVVEMEAPVILADRSEVHAAAA
AGRSFSRRASLLLVMTALTLPLRAMQTQWR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgatgtggagactgcaagtctccttctgtactctgtcgctgctgctgtccctg
tcgtctgctgccgagagcaaagcgcggagctgtagcgacgcaaggcaagcttataacgcc
aaaggattcagcctcgtcaatgtgcctcatcaggaaatatcaggtgagcacctgcgtgtc
tgttcccaggggtacacctgctgcacatccgagatggaggacgaactcaaccagcagagc
aaagtggagttcgagaacttggtcgaggagagcagccgcactatgaggacgacatttgtc
tcgaggcataaaaagtttgacgagtttttcttggagctgctagacaattctgagaagtct
cttcacggcatattcaaaatgacgtatgggaagctgtacatgaagaactcccaggtgttc
caggacctgttcgccgagctaaagcgctactacaccggaggcaacgtcaacctggaggag
atgctcaatgacttctggtccagactgctggagcgcatgttccagttactcaactcccag
taccaattcacagacgactacttggagtgtgtcagtaaatacacagatcagctaaagccc
tttggagatgtgccccggaaacttaaggcccaggtcaccagtgccttcatcgctgcacgg
acgtttgtccaggggctaatggtgggtcgggaggtcgccaacagggtagccaaggtgaat
gtaatcccagcatgtgtcaaagccttgacgaagatgctgtactgtccatactgtcgcagc
atgccagggctgaaaccctgtcacaactactgtcacaatgttatgaggggctgtttagca
aaccaggcagacctagatgctgaatggaacctcttcattgatgccatgttactggtggca
gaccgactgaaaggacccttcaacatcgaatcagttctagaaccgattgacgtcaagatc
tctaatgccatcatgaacatgcaggacaacagcatgcaggtgtcagccaaggtctttcaa
ggatgtggccagccgaagccatcaggaataggccggtcagcacggggcatctcagatgtg
ttcagtgctcgcttcagaccgttcacccgcgaagaaatgccaaccgcagcagctggaacg
agcctcgatagactgagggttgtgtggaggacaatgcaacacagtatgattgacatcaaa
gagaagttaaatgagtccaagaggttctggtccaacctgccagatgacatctgtgccaaa
ggcaatctcacagagtcggatgaggatcagtgctggaacagccacacgaagggcagatat
ttccctgaagtggtgaaggagggtctaaccaaccaggtgaacaacccagaggtggatgtg
gacatcaccaggcctgacacactgatacgacagcagatcatggctctacgtgtcatgacc
aacaaactaaagaacgcttacaatggaaacgacatctacttccaggactcaagtgaagag
ggcagtacttccggcagtggcagcggctgctctgaaggctgcacaacagagtttgttgtt
gttgaaatggaggctccagtgatcttagccgacagaagtgaagtacacgcagcagcagcc
gcaggcaggtccttttcccgcagagcctccctgctgctggtgatgaccgccctcaccctc
ccactccgagcaatgcagactcaatggagataa
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