Pseudoliparis swirei (Mariana hadal snailfish): 130192420
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Entry
130192420 CDS
T09868
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130192420
04812 Cytoskeleton proteins [BR:
pswi04812
]
130192420
Cilium and associated proteins [BR:
pswi03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
130192420
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
130192420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_NXF1-5
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
130192420
NCBI-ProteinID:
XP_056268382
LinkDB
All DBs
Position
4:complement(22013004..22043224)
Genome browser
AA seq
804 aa
AA seq
DB search
MESERTEGKTTRREKRTSVNERLVFLTPMVNSCKLHLTSVKALVPERAQRLTNSQEDKDT
TQYNPEKRLHACGELAQTPSVPSFASESAERPVHHLVPLGCLAQSGLDAVPHGSQDTRDR
SRRPTHSAGATYYREALYLSQPAGCSGGFKYDAVPGFPFPRSPYDTFASSIQRIDMDRRC
LEGCPQLGTMDELQLLNLQHNLITRIQHLSHLQQLVFLNLYDNHVTEMTGIESLFSLRIL
MLGKNRIRKICCLGSLSKLNILDLHDNQICRIENMSHLSELQVLNLAGNSISRVENLRGL
DGLTELNLRHNCVSAVTEVDRLPRLQRLFLSCNNISSSDQLVCLGESRSLSELTLDGNPV
ALETWYKQAVLRCVLHLKQLDMKRITDEDRRMAGVQARKEEEKKRESHKQTIHKEKRRLA
IRNAAQRWEGIRACLEPPPTNGAKEEVSPENSPAHSPAQTNGLAQEPSPDEPRRVSPGSG
PERPSVGAESRLRTNSRPNSPRDAKLVETGSSSVQSLSLSDSHLAELDGDTLRLFGPGAL
EALERGWGVQTASAVTAIAFRYISFDAILPALPRIRVKFPNLSHLIFLETNISRLPQLAA
LAQVKRLDQLTIHLEGNPVVSLALWRSFAIYRLHHLNLQRINGQEVTMNDVIAAERVFGT
LGHIAATETPPCRLLLLLEESRKRQLQFLLEGRGRRAALSPEELRDNGKLLGEGLSRALF
NYPNRDCSAESPEDGGVESSDRAALVEQYLQELVQRASDTNLKGEALHKLWPSMFGEMVR
DCVLEMRDRAAFCQASLAKLSETK
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggagcgaactgaaggcaaaacgacgcgtcgtgagaaacgcaccagtgtcaac
gagagattggtattcctcacccccatggtcaacagctgcaagttgcacctgacaagtgtc
aaagccctcgtgcctgagagagcccagaggctgaccaactctcaagaagacaaagacacc
actcagtacaacccagaaaaaaggttgcatgcttgcggagaacttgcacagacaccttct
gttccatcatttgccagcgaatctgcagagcgccctgtgcaccatctagtaccactcgga
tgtttagctcaaagcggtctggatgcagtgccacatggttcacaagatacaagagacaga
tctaggagaccaacccacagcgcaggggccacttactaccgggaggccttatacctttct
cagccagcaggttgttctggaggatttaaatatgatgcagtcccgggttttcccttccct
cgatcgccctacgacacttttgcatccagcattcaacgaatcgacatggacaggcgctgt
ctggagggatgcccccagctgggcactatggatgaactgcagctcctgaacctccagcac
aatctaatcacacggatccagcatctgtcacatctgcaacaactcgttttcctgaacctt
tacgacaatcacgttaccgaaatgactggcattgaatctctattctctctccgtatcctt
atgctggggaagaacagaatccggaagatatgttgcttgggaagcctgtccaaactgaac
atcctggacttgcatgacaatcagatctgcaggatagaaaacatgtctcacctgagcgag
ctgcaagtgctgaacctggcgggcaacagcatatccagagtggagaacctgcggggtctg
gacggtttgacggaactcaacctgcgacacaactgcgtctctgctgtgaccgaggtggac
cgtctgccccgcttgcagcgcctctttctcagctgcaacaacatcagcagttcggatcag
ctagtctgcctcggagagtcgcgctccctttccgagctcaccctggatgggaatcctgta
gccctggagacatggtacaagcaggctgtcctgcgctgtgtgcttcatctgaaacagctg
gacatgaagcgcatcacagacgaggatcggcgcatggctggtgtacaggctcgaaaagag
gaggagaagaagagggagagccacaagcagaccattcataaggagaagcggcgtctggcg
atccgtaatgcagcgcagcggtgggagggcatcagggcctgcctggagccgccaccaaca
aacggtgctaaagaagaagtcagtccggagaacagccccgcccacagccccgcccagacc
aatggccttgcacaggagccctctccggatgaacccagacgggtaagcccaggttcagga
ccagagcggccatcagtgggagcagagagcagactccgcaccaacagccgcccaaacagc
ccacgagatgccaagcttgtggaaacagggagcagcagtgttcagagcctgtccctctcc
gacagccacctggcggagctggacggagacaccctgcgcttgtttggacccggagccctg
gaggccctggagaggggctggggagttcagaccgcgagcgccgtcaccgcaatcgccttc
cgctacatcagcttcgacgccattcttccagcactgccgcgaataagggtcaaattcccc
aatctgtcgcacctgatcttcctggaaaccaacatcagccgtctgccccagctggcggcc
ctggctcaggtgaagcgtctggaccagctgactatccacctggagggcaacccagtggtc
agtctggctctgtggcgctccttcgccatctaccgcctccaccacctcaacctgcagagg
atcaatggccaggaggtgaccatgaatgatgtgatcgccgcagagcgcgtgttcgggacc
ctcggtcacatagcagccaccgaaactccaccctgccgactcctcctgctgctggaggag
tccaggaagcggcagctgcaattcctgttggaggggcgtggccggcgtgcagcactgagt
ccggaggagctgcgggacaatgggaagctcctgggagaagggctgagcagagcgctgttc
aactaccccaacagagactgcagtgcagagagccctgaggacggcggcgtggagtcatcg
gaccgcgccgccctggtagagcagtacctccaggagttggtccagagggcgtccgacacc
aatctgaagggcgaggccctgcacaagctgtggccctccatgtttggagagatggtgagg
gactgcgtgttggagatgagggaccgggcagccttctgccaagccagcctggccaagctc
tctgagaccaagtga
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