Pseudoliparis swirei (Mariana hadal snailfish): 130192479
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Entry
130192479 CDS
T09868
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130192479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130192479
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130192479
03012 Translation factors [BR:
pswi03012
]
130192479
04131 Membrane trafficking [BR:
pswi04131
]
130192479
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130192479
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130192479
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
130192479
Translation factors [BR:
pswi03012
]
Eukaryotic type
Elongation factors
130192479
Membrane trafficking [BR:
pswi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
130192479
Exosome [BR:
pswi04147
]
Exosomal proteins
Proteins found in most exosomes
130192479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
130192479
NCBI-ProteinID:
XP_056268516
LinkDB
All DBs
Position
1:complement(3469910..3474332)
Genome browser
AA seq
462 aa
AA seq
DB search
MAREKIHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEASEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETPKYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQTRFEEIQKEVSAYIKK
IGYNPAAVAFVPISGWHGDNMVEPSSNMTWFKGWKVERKEGTSNGVTLLEALDAIQPPSR
PTNKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPCNLSTEVKSVEMHHESLL
QAEPGDNVGFNIKNVSVKDIRRGNVAGDSKNDPPMGAESFKAQVIVLNHPGQISQGYTPV
LDCHTAHIACKFSELIEKVDRRSGKKIEDNPKFVKSGDACIAKMTPSKPMCVESFSDYAP
LGRFAVRDMRQTVAVGVIKSVEKKLPSGGKVTKSAQKADKKK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcaagggaaaagatccacatcaacatcgtggtcatcggccatgtcgactccggcaag
tccacctccaccggtcacctgatctacaaatgcggaggaatcgacaagagaaccatcgag
aagttcgagaaggaagcctccgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaagctgaaggccgagcgcgagcgtggcatcaccatcgacatcgctctgtggaagttt
gagacccccaagtattacgtgaccatcatcgatgcccccggacacagggacttcatcaag
aacatgatcaccggtacctctcaggctgactgcgccgtgttggtcgttgctgccggtgtt
ggtgagttcgaagccggcatctccaagaacggccagacccgcgagcacgccctgctggcc
tacaccctcggcgtgaagcagctcatcgtcggagtcaacaagatggactccaccgagccc
ccttacagccaaacccgtttcgaggaaatccaaaaggaagtgagcgcctacatcaagaag
atcggctacaaccccgccgccgtcgcctttgtccccatctctgggtggcacggcgacaac
atggttgagcccagcagcaatatgacctggttcaagggatggaaggttgagcgcaaggag
ggaacttcgaatggcgtcacactgctggaggctctggatgccatccagccgccatctcgc
cccaccaacaaacccctgcgtctgcccctgcaggacgtctacaagatcgggggtatcgga
accgtccccgtcggccgcgtggagaccggcatcatcaagcccggcatggtcgtgaccttc
gctccctgcaacctgtccaccgaggtgaagtccgtggagatgcaccacgagtctctgctc
caagccgagcccggagacaacgtgggcttcaacatcaagaacgtgtcggtcaaggacatc
cgccgcggcaacgtggccggagacagcaagaacgacccgcccatgggagctgaaagcttc
aaagcccaggtcatcgtcctgaaccaccccggtcagatctcccagggttacacccccgtg
ctggattgccacaccgctcacatcgcctgcaagttcagcgagctcatcgagaaggtcgac
cgtcgctccggcaagaagatcgaggacaaccccaagttcgtcaagtctggggacgcatgc
atcgccaagatgaccccatcgaagcccatgtgtgtggagagcttcagtgactacgctcca
ctgggtcgcttcgccgtgcgcgacatgaggcagaccgtggccgtcggcgtcatcaagtcc
gtggagaagaagctcccctccggcggcaaggtcaccaagtccgcacagaaggccgacaag
aagaaatga
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