Pseudoliparis swirei (Mariana hadal snailfish): 130192500
Help
Entry
130192500 CDS
T09868
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03272
Virion - Hepatitis viruses
pswi03273
Virion - Lassa virus and SFTS virus
pswi04140
Autophagy - animal
pswi04142
Lysosome
pswi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
130192500 (lamp1a)
03272 Virion - Hepatitis viruses
130192500 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130192500 (lamp1a)
04142 Lysosome
130192500 (lamp1a)
04140 Autophagy - animal
130192500 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130192500 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130192500 (lamp1a)
04090 CD molecules [BR:
pswi04090
]
130192500 (lamp1a)
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
130192500 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
130192500 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
130192500 (lamp1a)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
130192500 (lamp1a)
CD molecules [BR:
pswi04090
]
Proteins
130192500 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
DEC-1_N
DUF4191
VAS1_LD
Motif
Other DBs
NCBI-GeneID:
130192500
NCBI-ProteinID:
XP_056268507
LinkDB
All DBs
Position
4:15947834..15953814
Genome browser
AA seq
415 aa
AA seq
DB search
MRLSVAVASLLVAWLAGLGCIQAVTLEVNEGNTTCIKAELSATFSITYNSSSSTRTVTVS
LPNSTTVDADRSSCGADGSSPWLVAVFGTGHEMGMSFSTNSVMYSVANLTLQYNLSDASV
FPEANRSDVVTVVVPSVGIWATMNTTYRCMSPSTFVGEAAVTFSDMRLEAYMPGNDLSPT
ESVCTADQTSTTAPPTTAGTTTTAAPAPTPPGTPERGTYSVNNLNGTVCLLAQMALQLNV
SYFSPSQNKTVRELVNLTPNLTRSSGSCEAGSASLVLAQEGSSTLNFTFTLNSTSNKYHL
SGIALLANLSDAAAPFSAGNASLDYLRSTLGRSYICNAEQTLVVVTTFSLNTFRLQVQPF
EVTTNQFATAEECQTDQDKMLIPIVVGAALAGLVLIVLIAYLIGRRRSHAGYQTI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagactttctgtcgcggtggcttcgctcctcgtcgcctggttagcgggtttaggctgc
attcaggcggtcaccctcgaggtgaacgaggggaacaccacctgcatcaaggctgagctc
tccgcaaccttctccatcacgtacaacagctccagcagcacaagaacggtgacggtctct
ctgcccaactccaccacggtcgacgcagaccgcagctcatgcggcgcagacggcagctcg
ccatggctggtggcggtgtttggaacgggccatgagatggggatgagcttctcaaccaac
agcgtcatgtacagcgtcgcgaacctgaccctgcagtacaacctcagcgacgcctccgtc
ttcccggaggcgaacagatccgacgtggtcactgtggtggtgccttcagttgggatctgg
gcgacgatgaacaccacctaccgctgcatgagcccctccacttttgtcggcgaagcagct
gtcaccttctccgacatgaggctggaggcgtacatgccaggaaacgacctgagtcccaca
gaaagcgtgtgcacggcagatcagaccagcactacggctccacctacgactgccggcacc
acgaccaccgcggctccggcgccgaccccgccaggaacacctgagcggggaacctactcg
gtaaacaacctcaacggcacggtgtgcctcctggcccagatggcactgcagctcaacgtc
tcctacttctctccatcgcagaacaagaccgtccgagaattagtcaacctgactcccaat
ctgactcgttcatccggctcatgtgaagccggcagcgcttctttggttttggcccaggag
ggaagcagcacgctcaacttcaccttcactctgaactccacgagcaacaagtaccacctg
agtgggattgctctgcttgctaatttgtcagatgcagctgctccattctcagccggcaac
gcgagtctggactacctgcgcagtacgttgggccgctcctacatatgcaacgcagagcaa
actctggttgtcgtgacaaccttctctctcaacacattcagactgcaggtccaacccttt
gaagtcaccaccaatcagtttgctacagcggaggagtgtcagacggaccaagacaagatg
ctcatccccatcgttgtcggagcagctctcgccggcctggtgctgatcgtcctcattgca
tatctgataggcaggaggaggagccatgctggataccagaccatctga
DBGET
integrated database retrieval system
